Gene : AT1G24560 A. thaliana TAIR10
Defline:  (1 of 1) PTHR34937:SF1 - MYOSIN HEAVY CHAIN-RELATED Genomic Order:  2493
Name:  ? AT1G24560 Secondary Identifier:  ? PAC:19654109
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G24560 0.5kb upstream 0.5kb upstream 3964 true Chr1: 8701885-8705848 Arabidopsis thaliana
AT1G24560 0.5kb upstream 0.5kb upstream 500 false Chr1: 8701885-8702384 Arabidopsis thaliana
AT1G24560 0.5kb downstream 0.5kb downstream 3964 true Chr1: 8702385-8706348 Arabidopsis thaliana
AT1G24560 0.5kb downstream 0.5kb downstream 500 false Chr1: 8705849-8706348 Arabidopsis thaliana
AT1G24560 1.0kb upstream 1.0kb upstream 4464 true Chr1: 8701385-8705848 Arabidopsis thaliana
AT1G24560 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8701385-8702384 Arabidopsis thaliana
AT1G24560 1.0kb downstream 1.0kb downstream 4464 true Chr1: 8702385-8706848 Arabidopsis thaliana
AT1G24560 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8705849-8706848 Arabidopsis thaliana
AT1G24560 2.0kb upstream 2.0kb upstream 5464 true Chr1: 8700385-8705848 Arabidopsis thaliana
AT1G24560 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8700385-8702384 Arabidopsis thaliana
AT1G24560 2.0kb downstream 2.0kb downstream 5464 true Chr1: 8702385-8707848 Arabidopsis thaliana
AT1G24560 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8705849-8707848 Arabidopsis thaliana
AT1G24560 5.0kb upstream 5.0kb upstream 8464 true Chr1: 8697385-8705848 Arabidopsis thaliana
AT1G24560 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8697385-8702384 Arabidopsis thaliana
AT1G24560 5.0kb downstream 5.0kb downstream 8464 true Chr1: 8702385-8710848 Arabidopsis thaliana
AT1G24560 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8705849-8710848 Arabidopsis thaliana
AT1G24560 10.0kb upstream 10.0kb upstream 13464 true Chr1: 8692385-8705848 Arabidopsis thaliana
AT1G24560 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8692385-8702384 Arabidopsis thaliana
AT1G24560 10.0kb downstream 10.0kb downstream 13464 true Chr1: 8702385-8715848 Arabidopsis thaliana
AT1G24560 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8705849-8715848 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366152 5261 Brassicaceae View MSA
123831902 5264 Brassicales-Malvales View MSA
124342223 5266 SBM View MSA
124241204 5268 Malvidae View MSA
124061666 5270 Rosid View MSA
123740246 5271 Pentapetalae View MSA
122790533 5272 Eudicot View MSA
122044553 5273 Angiosperm View MSA
121345733 5274 Embryophyte View MSA
123380261 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.285        
cufflinks 13.104        
cufflinks 10.764       Low
cufflinks 15.049       High
cufflinks 11.419        
cufflinks 13.305        

0 Strain