Gene : AT1G24620 A. thaliana TAIR10
Defline:  (1 of 3) PTHR10891:SF605 - CALCIUM-BINDING PROTEIN CML25-RELATED Genomic Order:  2501
Name:  ? AT1G24620 Secondary Identifier:  ? PAC:19655254
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G24620 0.5kb upstream 0.5kb upstream 1248 true Chr1: 8723712-8724959 Arabidopsis thaliana
AT1G24620 0.5kb upstream 0.5kb upstream 500 false Chr1: 8724460-8724959 Arabidopsis thaliana
AT1G24620 0.5kb downstream 0.5kb downstream 1248 true Chr1: 8723212-8724459 Arabidopsis thaliana
AT1G24620 0.5kb downstream 0.5kb downstream 500 false Chr1: 8723212-8723711 Arabidopsis thaliana
AT1G24620 1.0kb upstream 1.0kb upstream 1748 true Chr1: 8723712-8725459 Arabidopsis thaliana
AT1G24620 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8724460-8725459 Arabidopsis thaliana
AT1G24620 1.0kb downstream 1.0kb downstream 1748 true Chr1: 8722712-8724459 Arabidopsis thaliana
AT1G24620 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8722712-8723711 Arabidopsis thaliana
AT1G24620 2.0kb upstream 2.0kb upstream 2748 true Chr1: 8723712-8726459 Arabidopsis thaliana
AT1G24620 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8724460-8726459 Arabidopsis thaliana
AT1G24620 2.0kb downstream 2.0kb downstream 2748 true Chr1: 8721712-8724459 Arabidopsis thaliana
AT1G24620 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8721712-8723711 Arabidopsis thaliana
AT1G24620 5.0kb upstream 5.0kb upstream 5748 true Chr1: 8723712-8729459 Arabidopsis thaliana
AT1G24620 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8724460-8729459 Arabidopsis thaliana
AT1G24620 5.0kb downstream 5.0kb downstream 5748 true Chr1: 8718712-8724459 Arabidopsis thaliana
AT1G24620 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8718712-8723711 Arabidopsis thaliana
AT1G24620 10.0kb upstream 10.0kb upstream 10748 true Chr1: 8723712-8734459 Arabidopsis thaliana
AT1G24620 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8724460-8734459 Arabidopsis thaliana
AT1G24620 10.0kb downstream 10.0kb downstream 10748 true Chr1: 8713712-8724459 Arabidopsis thaliana
AT1G24620 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8713712-8723711 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374449 5261 Brassicaceae View MSA
123836378 5264 Brassicales-Malvales View MSA
124322155 5266 SBM View MSA
124253055 5268 Malvidae View MSA
124050277 5270 Rosid View MSA
123736874 5271 Pentapetalae View MSA
122791196 5272 Eudicot View MSA
122047176 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121350734 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.02     Low Low
cufflinks 0.973        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.941        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.415        

0 Strain