Gene : GAMMA-ADAPTIN 1 A. thaliana TAIR10
Primary Identifier:  ? AT1G23900 Defline:  (1 of 3) K12391 - AP-1 complex subunit gamma-1 (AP1G1)
Genomic Order:  2421 Name:  ? AT1G23900
Secondary Identifier:  ? PAC:19654381
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G23900 0.5kb upstream 0.5kb upstream 6874 true Chr1: 8440646-8447519 Arabidopsis thaliana
AT1G23900 0.5kb upstream 0.5kb upstream 500 false Chr1: 8440646-8441145 Arabidopsis thaliana
AT1G23900 0.5kb downstream 0.5kb downstream 6874 true Chr1: 8441146-8448019 Arabidopsis thaliana
AT1G23900 0.5kb downstream 0.5kb downstream 500 false Chr1: 8447520-8448019 Arabidopsis thaliana
AT1G23900 1.0kb upstream 1.0kb upstream 7374 true Chr1: 8440146-8447519 Arabidopsis thaliana
AT1G23900 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8440146-8441145 Arabidopsis thaliana
AT1G23900 1.0kb downstream 1.0kb downstream 7374 true Chr1: 8441146-8448519 Arabidopsis thaliana
AT1G23900 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8447520-8448519 Arabidopsis thaliana
AT1G23900 2.0kb upstream 2.0kb upstream 8374 true Chr1: 8439146-8447519 Arabidopsis thaliana
AT1G23900 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8439146-8441145 Arabidopsis thaliana
AT1G23900 2.0kb downstream 2.0kb downstream 8374 true Chr1: 8441146-8449519 Arabidopsis thaliana
AT1G23900 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8447520-8449519 Arabidopsis thaliana
AT1G23900 5.0kb upstream 5.0kb upstream 11374 true Chr1: 8436146-8447519 Arabidopsis thaliana
AT1G23900 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8436146-8441145 Arabidopsis thaliana
AT1G23900 5.0kb downstream 5.0kb downstream 11374 true Chr1: 8441146-8452519 Arabidopsis thaliana
AT1G23900 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8447520-8452519 Arabidopsis thaliana
AT1G23900 10.0kb upstream 10.0kb upstream 16374 true Chr1: 8431146-8447519 Arabidopsis thaliana
AT1G23900 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8431146-8441145 Arabidopsis thaliana
AT1G23900 10.0kb downstream 10.0kb downstream 16374 true Chr1: 8441146-8457519 Arabidopsis thaliana
AT1G23900 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8447520-8457519 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380823 5261 Brassicaceae View MSA
123840670 5264 Brassicales-Malvales View MSA
124342121 5266 SBM View MSA
124248959 5268 Malvidae View MSA
124061058 5270 Rosid View MSA
123743734 5271 Pentapetalae View MSA
122787566 5272 Eudicot View MSA
122043266 5273 Angiosperm View MSA
121349625 5274 Embryophyte View MSA
123427585 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.795        
cufflinks 4.834        
cufflinks 3.463       Low
cufflinks 5.334        
cufflinks 3.776        
cufflinks 5.437        

0 Strain