Gene : AT1G23950 A. thaliana TAIR10
Defline:  (1 of 19) PTHR31260:SF28 - UPF0725 PROTEIN EMB2204 Genomic Order:  2425
Name:  ? AT1G23950 Secondary Identifier:  ? PAC:19652567
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G23950 0.5kb upstream 0.5kb upstream 2384 true Chr1: 8469534-8471917 Arabidopsis thaliana
AT1G23950 0.5kb upstream 0.5kb upstream 500 false Chr1: 8471418-8471917 Arabidopsis thaliana
AT1G23950 0.5kb downstream 0.5kb downstream 2384 true Chr1: 8469034-8471417 Arabidopsis thaliana
AT1G23950 0.5kb downstream 0.5kb downstream 500 false Chr1: 8469034-8469533 Arabidopsis thaliana
AT1G23950 1.0kb upstream 1.0kb upstream 2884 true Chr1: 8469534-8472417 Arabidopsis thaliana
AT1G23950 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8471418-8472417 Arabidopsis thaliana
AT1G23950 1.0kb downstream 1.0kb downstream 2884 true Chr1: 8468534-8471417 Arabidopsis thaliana
AT1G23950 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8468534-8469533 Arabidopsis thaliana
AT1G23950 2.0kb upstream 2.0kb upstream 3884 true Chr1: 8469534-8473417 Arabidopsis thaliana
AT1G23950 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8471418-8473417 Arabidopsis thaliana
AT1G23950 2.0kb downstream 2.0kb downstream 3884 true Chr1: 8467534-8471417 Arabidopsis thaliana
AT1G23950 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8467534-8469533 Arabidopsis thaliana
AT1G23950 5.0kb upstream 5.0kb upstream 6884 true Chr1: 8469534-8476417 Arabidopsis thaliana
AT1G23950 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8471418-8476417 Arabidopsis thaliana
AT1G23950 5.0kb downstream 5.0kb downstream 6884 true Chr1: 8464534-8471417 Arabidopsis thaliana
AT1G23950 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8464534-8469533 Arabidopsis thaliana
AT1G23950 10.0kb upstream 10.0kb upstream 11884 true Chr1: 8469534-8481417 Arabidopsis thaliana
AT1G23950 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8471418-8481417 Arabidopsis thaliana
AT1G23950 10.0kb downstream 10.0kb downstream 11884 true Chr1: 8459534-8471417 Arabidopsis thaliana
AT1G23950 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8459534-8469533 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511751 5273 Angiosperm View MSA
122378564 5261 Brassicaceae View MSA
123801912 5264 Brassicales-Malvales View MSA
124299161 5266 SBM View MSA
124150649 5268 Malvidae View MSA
123876230 5270 Rosid View MSA
123459931 5271 Pentapetalae View MSA
122495313 5272 Eudicot View MSA
120784782 5274 Embryophyte View MSA
122826676 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.136        
cufflinks 2.869        
cufflinks 2.755       Low
cufflinks 3.26       High
cufflinks 2.902        
cufflinks 3.286       High

0 Strain