Gene : AT1G23970 A. thaliana TAIR10
Defline:  (1 of 19) PTHR31260:SF28 - UPF0725 PROTEIN EMB2204 Genomic Order:  2428
Name:  ? AT1G23970 Secondary Identifier:  ? PAC:19652117
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G23970 0.5kb upstream 0.5kb upstream 2363 true Chr1: 8482013-8484375 Arabidopsis thaliana
AT1G23970 0.5kb upstream 0.5kb upstream 500 false Chr1: 8483876-8484375 Arabidopsis thaliana
AT1G23970 0.5kb downstream 0.5kb downstream 2363 true Chr1: 8481513-8483875 Arabidopsis thaliana
AT1G23970 0.5kb downstream 0.5kb downstream 500 false Chr1: 8481513-8482012 Arabidopsis thaliana
AT1G23970 1.0kb upstream 1.0kb upstream 2863 true Chr1: 8482013-8484875 Arabidopsis thaliana
AT1G23970 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8483876-8484875 Arabidopsis thaliana
AT1G23970 1.0kb downstream 1.0kb downstream 2863 true Chr1: 8481013-8483875 Arabidopsis thaliana
AT1G23970 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8481013-8482012 Arabidopsis thaliana
AT1G23970 2.0kb upstream 2.0kb upstream 3863 true Chr1: 8482013-8485875 Arabidopsis thaliana
AT1G23970 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8483876-8485875 Arabidopsis thaliana
AT1G23970 2.0kb downstream 2.0kb downstream 3863 true Chr1: 8480013-8483875 Arabidopsis thaliana
AT1G23970 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8480013-8482012 Arabidopsis thaliana
AT1G23970 5.0kb upstream 5.0kb upstream 6863 true Chr1: 8482013-8488875 Arabidopsis thaliana
AT1G23970 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8483876-8488875 Arabidopsis thaliana
AT1G23970 5.0kb downstream 5.0kb downstream 6863 true Chr1: 8477013-8483875 Arabidopsis thaliana
AT1G23970 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8477013-8482012 Arabidopsis thaliana
AT1G23970 10.0kb upstream 10.0kb upstream 11863 true Chr1: 8482013-8493875 Arabidopsis thaliana
AT1G23970 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8483876-8493875 Arabidopsis thaliana
AT1G23970 10.0kb downstream 10.0kb downstream 11863 true Chr1: 8472013-8483875 Arabidopsis thaliana
AT1G23970 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8472013-8482012 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511751 5273 Angiosperm View MSA
122378564 5261 Brassicaceae View MSA
123801912 5264 Brassicales-Malvales View MSA
124299161 5266 SBM View MSA
124150649 5268 Malvidae View MSA
123876230 5270 Rosid View MSA
123459931 5271 Pentapetalae View MSA
122495313 5272 Eudicot View MSA
120784782 5274 Embryophyte View MSA
122826676 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.909        
cufflinks 6.098        
cufflinks 1.504       Low
cufflinks 5.316        
cufflinks 1.845        
cufflinks 6.482       High

0 Strain