Gene : KNAT6 A. thaliana TAIR10
Primary Identifier:  ? AT1G23380 Defline:  (1 of 2) PTHR11850:SF99 - HOMEOBOX PROTEIN KNOTTED-1-LIKE 2-RELATED
Genomic Order:  2371 Name:  ? AT1G23380
Secondary Identifier:  ? PAC:19656611
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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G23380 0.5kb upstream 0.5kb upstream 5861 true Chr1: 8297291-8303151 Arabidopsis thaliana
AT1G23380 0.5kb upstream 0.5kb upstream 500 false Chr1: 8302652-8303151 Arabidopsis thaliana
AT1G23380 0.5kb downstream 0.5kb downstream 5861 true Chr1: 8296791-8302651 Arabidopsis thaliana
AT1G23380 0.5kb downstream 0.5kb downstream 500 false Chr1: 8296791-8297290 Arabidopsis thaliana
AT1G23380 1.0kb upstream 1.0kb upstream 6361 true Chr1: 8297291-8303651 Arabidopsis thaliana
AT1G23380 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8302652-8303651 Arabidopsis thaliana
AT1G23380 1.0kb downstream 1.0kb downstream 6361 true Chr1: 8296291-8302651 Arabidopsis thaliana
AT1G23380 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8296291-8297290 Arabidopsis thaliana
AT1G23380 2.0kb upstream 2.0kb upstream 7361 true Chr1: 8297291-8304651 Arabidopsis thaliana
AT1G23380 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8302652-8304651 Arabidopsis thaliana
AT1G23380 2.0kb downstream 2.0kb downstream 7361 true Chr1: 8295291-8302651 Arabidopsis thaliana
AT1G23380 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8295291-8297290 Arabidopsis thaliana
AT1G23380 5.0kb upstream 5.0kb upstream 10361 true Chr1: 8297291-8307651 Arabidopsis thaliana
AT1G23380 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8302652-8307651 Arabidopsis thaliana
AT1G23380 5.0kb downstream 5.0kb downstream 10361 true Chr1: 8292291-8302651 Arabidopsis thaliana
AT1G23380 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8292291-8297290 Arabidopsis thaliana
AT1G23380 10.0kb upstream 10.0kb upstream 15361 true Chr1: 8297291-8312651 Arabidopsis thaliana
AT1G23380 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8302652-8312651 Arabidopsis thaliana
AT1G23380 10.0kb downstream 10.0kb downstream 15361 true Chr1: 8287291-8302651 Arabidopsis thaliana
AT1G23380 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8287291-8297290 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369469 5261 Brassicaceae View MSA
123833445 5264 Brassicales-Malvales View MSA
124351620 5266 SBM View MSA
124246446 5268 Malvidae View MSA
124071044 5270 Rosid View MSA
123750536 5271 Pentapetalae View MSA
122794934 5272 Eudicot View MSA
122051072 5273 Angiosperm View MSA
121351483 5274 Embryophyte View MSA
123428758 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.101     Low  
cufflinks 2.434       High
cufflinks 0.091     Low  
cufflinks 1.922        
cufflinks 0.088     Low  
cufflinks 1.698        

0 Strain