Gene : AT1G23440 A. thaliana TAIR10
Defline:  (1 of 2) 3.4.19.3 - Pyroglutamyl-peptidase I / Pyrrolidone-carboxylate peptidase Genomic Order:  2376
Name:  ? AT1G23440 Secondary Identifier:  ? PAC:19652069
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G23440 0.5kb upstream 0.5kb upstream 3061 true Chr1: 8321180-8324240 Arabidopsis thaliana
AT1G23440 0.5kb upstream 0.5kb upstream 500 false Chr1: 8321180-8321679 Arabidopsis thaliana
AT1G23440 0.5kb downstream 0.5kb downstream 3061 true Chr1: 8321680-8324740 Arabidopsis thaliana
AT1G23440 0.5kb downstream 0.5kb downstream 500 false Chr1: 8324241-8324740 Arabidopsis thaliana
AT1G23440 1.0kb upstream 1.0kb upstream 3561 true Chr1: 8320680-8324240 Arabidopsis thaliana
AT1G23440 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8320680-8321679 Arabidopsis thaliana
AT1G23440 1.0kb downstream 1.0kb downstream 3561 true Chr1: 8321680-8325240 Arabidopsis thaliana
AT1G23440 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8324241-8325240 Arabidopsis thaliana
AT1G23440 2.0kb upstream 2.0kb upstream 4561 true Chr1: 8319680-8324240 Arabidopsis thaliana
AT1G23440 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8319680-8321679 Arabidopsis thaliana
AT1G23440 2.0kb downstream 2.0kb downstream 4561 true Chr1: 8321680-8326240 Arabidopsis thaliana
AT1G23440 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8324241-8326240 Arabidopsis thaliana
AT1G23440 5.0kb upstream 5.0kb upstream 7561 true Chr1: 8316680-8324240 Arabidopsis thaliana
AT1G23440 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8316680-8321679 Arabidopsis thaliana
AT1G23440 5.0kb downstream 5.0kb downstream 7561 true Chr1: 8321680-8329240 Arabidopsis thaliana
AT1G23440 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8324241-8329240 Arabidopsis thaliana
AT1G23440 10.0kb upstream 10.0kb upstream 12561 true Chr1: 8311680-8324240 Arabidopsis thaliana
AT1G23440 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8311680-8321679 Arabidopsis thaliana
AT1G23440 10.0kb downstream 10.0kb downstream 12561 true Chr1: 8321680-8334240 Arabidopsis thaliana
AT1G23440 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8324241-8334240 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026217 5273 Angiosperm View MSA
122370595 5261 Brassicaceae View MSA
123799993 5264 Brassicales-Malvales View MSA
124351498 5266 SBM View MSA
124248694 5268 Malvidae View MSA
124062104 5270 Rosid View MSA
123741081 5271 Pentapetalae View MSA
122790399 5272 Eudicot View MSA
121348835 5274 Embryophyte View MSA
123428644 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.303        
cufflinks 8.986       Low
cufflinks 10.854        
cufflinks 12.974        
cufflinks 13.996       High
cufflinks 9.515        

0 Strain