Gene : AT1G23190 A. thaliana TAIR10
Defline:  (1 of 3) K01835 - phosphoglucomutase (pgm) Genomic Order:  2351
Name:  ? AT1G23190 Secondary Identifier:  ? PAC:19656579
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Sequence Feature Displayer

Ontology Annotation Displayer

8 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana GLUCOSE1PMETAB-PWY Arabidopsis thaliana pathologic  
Athaliana GLYCOGENSYNTH-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-3801 Arabidopsis thaliana pathologic  
Athaliana PWY-622 Arabidopsis thaliana pathologic  
Athaliana PWY66-422 Arabidopsis thaliana pathologic  
Athaliana PWY-7238 Arabidopsis thaliana pathologic  
Athaliana PWY-7343 Arabidopsis thaliana pathologic  
Athaliana SUCSYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G23190 0.5kb upstream 0.5kb upstream 5101 true Chr1: 8219369-8224469 Arabidopsis thaliana
AT1G23190 0.5kb upstream 0.5kb upstream 500 false Chr1: 8219369-8219868 Arabidopsis thaliana
AT1G23190 0.5kb downstream 0.5kb downstream 5101 true Chr1: 8219869-8224969 Arabidopsis thaliana
AT1G23190 0.5kb downstream 0.5kb downstream 500 false Chr1: 8224470-8224969 Arabidopsis thaliana
AT1G23190 1.0kb upstream 1.0kb upstream 5601 true Chr1: 8218869-8224469 Arabidopsis thaliana
AT1G23190 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8218869-8219868 Arabidopsis thaliana
AT1G23190 1.0kb downstream 1.0kb downstream 5601 true Chr1: 8219869-8225469 Arabidopsis thaliana
AT1G23190 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8224470-8225469 Arabidopsis thaliana
AT1G23190 2.0kb upstream 2.0kb upstream 6601 true Chr1: 8217869-8224469 Arabidopsis thaliana
AT1G23190 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8217869-8219868 Arabidopsis thaliana
AT1G23190 2.0kb downstream 2.0kb downstream 6601 true Chr1: 8219869-8226469 Arabidopsis thaliana
AT1G23190 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8224470-8226469 Arabidopsis thaliana
AT1G23190 5.0kb upstream 5.0kb upstream 9601 true Chr1: 8214869-8224469 Arabidopsis thaliana
AT1G23190 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8214869-8219868 Arabidopsis thaliana
AT1G23190 5.0kb downstream 5.0kb downstream 9601 true Chr1: 8219869-8229469 Arabidopsis thaliana
AT1G23190 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8224470-8229469 Arabidopsis thaliana
AT1G23190 10.0kb upstream 10.0kb upstream 14601 true Chr1: 8209869-8224469 Arabidopsis thaliana
AT1G23190 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8209869-8219868 Arabidopsis thaliana
AT1G23190 10.0kb downstream 10.0kb downstream 14601 true Chr1: 8219869-8234469 Arabidopsis thaliana
AT1G23190 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8224470-8234469 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364390 5261 Brassicaceae View MSA
123835209 5264 Brassicales-Malvales View MSA
124342115 5266 SBM View MSA
124253593 5268 Malvidae View MSA
124065382 5270 Rosid View MSA
123740036 5271 Pentapetalae View MSA
122791577 5272 Eudicot View MSA
122046067 5273 Angiosperm View MSA
121346784 5274 Embryophyte View MSA
123426013 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.2        
cufflinks 20.101       Low
cufflinks 23.827        
cufflinks 28.907       High
cufflinks 25.332        
cufflinks 27.206        

0 Strain