Gene : AT1G23030 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23315//PTHR23315:SF52 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED Genomic Order:  2330
Name:  ? AT1G23030 Secondary Identifier:  ? PAC:19656011
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G23030 0.5kb upstream 0.5kb upstream 2932 true Chr1: 8156146-8159077 Arabidopsis thaliana
AT1G23030 0.5kb upstream 0.5kb upstream 500 false Chr1: 8156146-8156645 Arabidopsis thaliana
AT1G23030 0.5kb downstream 0.5kb downstream 2932 true Chr1: 8156646-8159577 Arabidopsis thaliana
AT1G23030 0.5kb downstream 0.5kb downstream 500 false Chr1: 8159078-8159577 Arabidopsis thaliana
AT1G23030 1.0kb upstream 1.0kb upstream 3432 true Chr1: 8155646-8159077 Arabidopsis thaliana
AT1G23030 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8155646-8156645 Arabidopsis thaliana
AT1G23030 1.0kb downstream 1.0kb downstream 3432 true Chr1: 8156646-8160077 Arabidopsis thaliana
AT1G23030 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8159078-8160077 Arabidopsis thaliana
AT1G23030 2.0kb upstream 2.0kb upstream 4432 true Chr1: 8154646-8159077 Arabidopsis thaliana
AT1G23030 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8154646-8156645 Arabidopsis thaliana
AT1G23030 2.0kb downstream 2.0kb downstream 4432 true Chr1: 8156646-8161077 Arabidopsis thaliana
AT1G23030 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8159078-8161077 Arabidopsis thaliana
AT1G23030 5.0kb upstream 5.0kb upstream 7432 true Chr1: 8151646-8159077 Arabidopsis thaliana
AT1G23030 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8151646-8156645 Arabidopsis thaliana
AT1G23030 5.0kb downstream 5.0kb downstream 7432 true Chr1: 8156646-8164077 Arabidopsis thaliana
AT1G23030 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8159078-8164077 Arabidopsis thaliana
AT1G23030 10.0kb upstream 10.0kb upstream 12432 true Chr1: 8146646-8159077 Arabidopsis thaliana
AT1G23030 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8146646-8156645 Arabidopsis thaliana
AT1G23030 10.0kb downstream 10.0kb downstream 12432 true Chr1: 8156646-8169077 Arabidopsis thaliana
AT1G23030 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8159078-8169077 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366355 5261 Brassicaceae View MSA
123835937 5264 Brassicales-Malvales View MSA
124339411 5266 SBM View MSA
124237538 5268 Malvidae View MSA
124062819 5270 Rosid View MSA
123743592 5271 Pentapetalae View MSA
122789387 5272 Eudicot View MSA
122050659 5273 Angiosperm View MSA
121312051 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.404       High
cufflinks 14.865        
cufflinks 13.101        
cufflinks 11.984        
cufflinks 11.529        
cufflinks 21.2       High

0 Strain