Gene : AT1G22980 A. thaliana TAIR10
Defline:  (1 of 3) PTHR15492:SF1 - CYCLIN-D1-BINDING PROTEIN 1 Genomic Order:  2324
Name:  ? AT1G22980 Secondary Identifier:  ? PAC:19655677
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G22980 0.5kb upstream 0.5kb upstream 2407 true Chr1: 8132444-8134850 Arabidopsis thaliana
AT1G22980 0.5kb upstream 0.5kb upstream 500 false Chr1: 8134351-8134850 Arabidopsis thaliana
AT1G22980 0.5kb downstream 0.5kb downstream 2407 true Chr1: 8131944-8134350 Arabidopsis thaliana
AT1G22980 0.5kb downstream 0.5kb downstream 500 false Chr1: 8131944-8132443 Arabidopsis thaliana
AT1G22980 1.0kb upstream 1.0kb upstream 2907 true Chr1: 8132444-8135350 Arabidopsis thaliana
AT1G22980 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8134351-8135350 Arabidopsis thaliana
AT1G22980 1.0kb downstream 1.0kb downstream 2907 true Chr1: 8131444-8134350 Arabidopsis thaliana
AT1G22980 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8131444-8132443 Arabidopsis thaliana
AT1G22980 2.0kb upstream 2.0kb upstream 3907 true Chr1: 8132444-8136350 Arabidopsis thaliana
AT1G22980 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8134351-8136350 Arabidopsis thaliana
AT1G22980 2.0kb downstream 2.0kb downstream 3907 true Chr1: 8130444-8134350 Arabidopsis thaliana
AT1G22980 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8130444-8132443 Arabidopsis thaliana
AT1G22980 5.0kb upstream 5.0kb upstream 6907 true Chr1: 8132444-8139350 Arabidopsis thaliana
AT1G22980 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8134351-8139350 Arabidopsis thaliana
AT1G22980 5.0kb downstream 5.0kb downstream 6907 true Chr1: 8127444-8134350 Arabidopsis thaliana
AT1G22980 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8127444-8132443 Arabidopsis thaliana
AT1G22980 10.0kb upstream 10.0kb upstream 11907 true Chr1: 8132444-8144350 Arabidopsis thaliana
AT1G22980 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8134351-8144350 Arabidopsis thaliana
AT1G22980 10.0kb downstream 10.0kb downstream 11907 true Chr1: 8122444-8134350 Arabidopsis thaliana
AT1G22980 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8122444-8132443 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121495600 5273 Angiosperm View MSA
122331730 5261 Brassicaceae View MSA
123772880 5264 Brassicales-Malvales View MSA
124271386 5266 SBM View MSA
124127378 5268 Malvidae View MSA
123856232 5270 Rosid View MSA
123442172 5271 Pentapetalae View MSA
122477750 5272 Eudicot View MSA
120768964 5274 Embryophyte View MSA
122811345 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.189     Low  
cufflinks 0.86        
cufflinks 0.139     Low  
cufflinks 1.305        
cufflinks 0.045     Low Low
cufflinks 1.175        

0 Strain