Gene : AT1G22882 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12953//PTHR12953:SF1 - MEMBRANE PROTEIN CH1 RELATED // GALACTOSE-BINDING PROTEIN Genomic Order:  2313
Name:  ? AT1G22882 Secondary Identifier:  ? PAC:19649372
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G22882 0.5kb upstream 0.5kb upstream 3085 true Chr1: 8098267-8101351 Arabidopsis thaliana
AT1G22882 0.5kb upstream 0.5kb upstream 500 false Chr1: 8098267-8098766 Arabidopsis thaliana
AT1G22882 0.5kb downstream 0.5kb downstream 3085 true Chr1: 8098767-8101851 Arabidopsis thaliana
AT1G22882 0.5kb downstream 0.5kb downstream 500 false Chr1: 8101352-8101851 Arabidopsis thaliana
AT1G22882 1.0kb upstream 1.0kb upstream 3585 true Chr1: 8097767-8101351 Arabidopsis thaliana
AT1G22882 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8097767-8098766 Arabidopsis thaliana
AT1G22882 1.0kb downstream 1.0kb downstream 3585 true Chr1: 8098767-8102351 Arabidopsis thaliana
AT1G22882 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8101352-8102351 Arabidopsis thaliana
AT1G22882 2.0kb upstream 2.0kb upstream 4585 true Chr1: 8096767-8101351 Arabidopsis thaliana
AT1G22882 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8096767-8098766 Arabidopsis thaliana
AT1G22882 2.0kb downstream 2.0kb downstream 4585 true Chr1: 8098767-8103351 Arabidopsis thaliana
AT1G22882 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8101352-8103351 Arabidopsis thaliana
AT1G22882 5.0kb upstream 5.0kb upstream 7585 true Chr1: 8093767-8101351 Arabidopsis thaliana
AT1G22882 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8093767-8098766 Arabidopsis thaliana
AT1G22882 5.0kb downstream 5.0kb downstream 7585 true Chr1: 8098767-8106351 Arabidopsis thaliana
AT1G22882 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8101352-8106351 Arabidopsis thaliana
AT1G22882 10.0kb upstream 10.0kb upstream 12585 true Chr1: 8088767-8101351 Arabidopsis thaliana
AT1G22882 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8088767-8098766 Arabidopsis thaliana
AT1G22882 10.0kb downstream 10.0kb downstream 12585 true Chr1: 8098767-8111351 Arabidopsis thaliana
AT1G22882 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8101352-8111351 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372603 5261 Brassicaceae View MSA
123836519 5264 Brassicales-Malvales View MSA
124339256 5266 SBM View MSA
124236857 5268 Malvidae View MSA
124061836 5270 Rosid View MSA
123744151 5271 Pentapetalae View MSA
122792013 5272 Eudicot View MSA
122048121 5273 Angiosperm View MSA
121348986 5274 Embryophyte View MSA
123381113 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.459     High High
cufflinks 13.089        
cufflinks 19.289        
cufflinks 12.929        
cufflinks 19.292        
cufflinks 16.549        

0 Strain