Gene : AT1G22900 A. thaliana TAIR10
Defline:  (1 of 5) PTHR21495//PTHR21495:SF71 - NUCLEOPORIN-RELATED // DIRIGENT PROTEIN 1-RELATED Genomic Order:  2316
Name:  ? AT1G22900 Secondary Identifier:  ? PAC:19649766
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G22900 0.5kb upstream 0.5kb upstream 1347 true Chr1: 8103659-8105005 Arabidopsis thaliana
AT1G22900 0.5kb upstream 0.5kb upstream 500 false Chr1: 8104506-8105005 Arabidopsis thaliana
AT1G22900 0.5kb downstream 0.5kb downstream 1347 true Chr1: 8103159-8104505 Arabidopsis thaliana
AT1G22900 0.5kb downstream 0.5kb downstream 500 false Chr1: 8103159-8103658 Arabidopsis thaliana
AT1G22900 1.0kb upstream 1.0kb upstream 1847 true Chr1: 8103659-8105505 Arabidopsis thaliana
AT1G22900 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8104506-8105505 Arabidopsis thaliana
AT1G22900 1.0kb downstream 1.0kb downstream 1847 true Chr1: 8102659-8104505 Arabidopsis thaliana
AT1G22900 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8102659-8103658 Arabidopsis thaliana
AT1G22900 2.0kb upstream 2.0kb upstream 2847 true Chr1: 8103659-8106505 Arabidopsis thaliana
AT1G22900 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8104506-8106505 Arabidopsis thaliana
AT1G22900 2.0kb downstream 2.0kb downstream 2847 true Chr1: 8101659-8104505 Arabidopsis thaliana
AT1G22900 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8101659-8103658 Arabidopsis thaliana
AT1G22900 5.0kb upstream 5.0kb upstream 5847 true Chr1: 8103659-8109505 Arabidopsis thaliana
AT1G22900 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8104506-8109505 Arabidopsis thaliana
AT1G22900 5.0kb downstream 5.0kb downstream 5847 true Chr1: 8098659-8104505 Arabidopsis thaliana
AT1G22900 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8098659-8103658 Arabidopsis thaliana
AT1G22900 10.0kb upstream 10.0kb upstream 10847 true Chr1: 8103659-8114505 Arabidopsis thaliana
AT1G22900 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8104506-8114505 Arabidopsis thaliana
AT1G22900 10.0kb downstream 10.0kb downstream 10847 true Chr1: 8093659-8104505 Arabidopsis thaliana
AT1G22900 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8093659-8103658 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344191 5261 Brassicaceae View MSA
123784232 5264 Brassicales-Malvales View MSA
124282428 5266 SBM View MSA
124137037 5268 Malvidae View MSA
124074832 5270 Rosid View MSA
123751910 5271 Pentapetalae View MSA
122797233 5272 Eudicot View MSA
122051134 5273 Angiosperm View MSA
121351582 5274 Embryophyte View MSA
123382236 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.917        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.007        
cufflinks 0.019     Low Low
cufflinks 2.134        
cufflinks 0.038     Low  

0 Strain