Gene : GI A. thaliana TAIR10
Primary Identifier:  ? AT1G22770 Defline:  (1 of 1) K12124 - GIGANTEA (GI)
Genomic Order:  2302 Name:  ? AT1G22770
Secondary Identifier:  ? PAC:19656885
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G22770 0.5kb upstream 0.5kb upstream 6373 true Chr1: 8061344-8067716 Arabidopsis thaliana
AT1G22770 0.5kb upstream 0.5kb upstream 500 false Chr1: 8061344-8061843 Arabidopsis thaliana
AT1G22770 0.5kb downstream 0.5kb downstream 6373 true Chr1: 8061844-8068216 Arabidopsis thaliana
AT1G22770 0.5kb downstream 0.5kb downstream 500 false Chr1: 8067717-8068216 Arabidopsis thaliana
AT1G22770 1.0kb upstream 1.0kb upstream 6873 true Chr1: 8060844-8067716 Arabidopsis thaliana
AT1G22770 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8060844-8061843 Arabidopsis thaliana
AT1G22770 1.0kb downstream 1.0kb downstream 6873 true Chr1: 8061844-8068716 Arabidopsis thaliana
AT1G22770 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8067717-8068716 Arabidopsis thaliana
AT1G22770 2.0kb upstream 2.0kb upstream 7873 true Chr1: 8059844-8067716 Arabidopsis thaliana
AT1G22770 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8059844-8061843 Arabidopsis thaliana
AT1G22770 2.0kb downstream 2.0kb downstream 7873 true Chr1: 8061844-8069716 Arabidopsis thaliana
AT1G22770 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8067717-8069716 Arabidopsis thaliana
AT1G22770 5.0kb upstream 5.0kb upstream 10873 true Chr1: 8056844-8067716 Arabidopsis thaliana
AT1G22770 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8056844-8061843 Arabidopsis thaliana
AT1G22770 5.0kb downstream 5.0kb downstream 10873 true Chr1: 8061844-8072716 Arabidopsis thaliana
AT1G22770 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8067717-8072716 Arabidopsis thaliana
AT1G22770 10.0kb upstream 10.0kb upstream 15873 true Chr1: 8051844-8067716 Arabidopsis thaliana
AT1G22770 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8051844-8061843 Arabidopsis thaliana
AT1G22770 10.0kb downstream 10.0kb downstream 15873 true Chr1: 8061844-8077716 Arabidopsis thaliana
AT1G22770 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8067717-8077716 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364911 5261 Brassicaceae View MSA
123829698 5264 Brassicales-Malvales View MSA
124337179 5266 SBM View MSA
124241531 5268 Malvidae View MSA
124064536 5270 Rosid View MSA
123738488 5271 Pentapetalae View MSA
122787616 5272 Eudicot View MSA
122046361 5273 Angiosperm View MSA
121310594 5274 Embryophyte View MSA
123348039 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.528       Low
cufflinks 26.106        
cufflinks 23.725        
cufflinks 29.578        
cufflinks 26.477     High  
cufflinks 16.242        

0 Strain