Gene : AT1G22600 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23241//PTHR23241:SF50 - LATE EMBRYOGENESIS ABUNDANT PLANTS LEA-RELATED // LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2283
Name:  ? AT1G22600 Secondary Identifier:  ? PAC:19655380
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G22600 0.5kb upstream 0.5kb upstream 2577 true Chr1: 7987141-7989717 Arabidopsis thaliana
AT1G22600 0.5kb upstream 0.5kb upstream 500 false Chr1: 7989218-7989717 Arabidopsis thaliana
AT1G22600 0.5kb downstream 0.5kb downstream 2577 true Chr1: 7986641-7989217 Arabidopsis thaliana
AT1G22600 0.5kb downstream 0.5kb downstream 500 false Chr1: 7986641-7987140 Arabidopsis thaliana
AT1G22600 1.0kb upstream 1.0kb upstream 3077 true Chr1: 7987141-7990217 Arabidopsis thaliana
AT1G22600 1.0kb upstream 1.0kb upstream 1000 false Chr1: 7989218-7990217 Arabidopsis thaliana
AT1G22600 1.0kb downstream 1.0kb downstream 3077 true Chr1: 7986141-7989217 Arabidopsis thaliana
AT1G22600 1.0kb downstream 1.0kb downstream 1000 false Chr1: 7986141-7987140 Arabidopsis thaliana
AT1G22600 2.0kb upstream 2.0kb upstream 4077 true Chr1: 7987141-7991217 Arabidopsis thaliana
AT1G22600 2.0kb upstream 2.0kb upstream 2000 false Chr1: 7989218-7991217 Arabidopsis thaliana
AT1G22600 2.0kb downstream 2.0kb downstream 4077 true Chr1: 7985141-7989217 Arabidopsis thaliana
AT1G22600 2.0kb downstream 2.0kb downstream 2000 false Chr1: 7985141-7987140 Arabidopsis thaliana
AT1G22600 5.0kb upstream 5.0kb upstream 7077 true Chr1: 7987141-7994217 Arabidopsis thaliana
AT1G22600 5.0kb upstream 5.0kb upstream 5000 false Chr1: 7989218-7994217 Arabidopsis thaliana
AT1G22600 5.0kb downstream 5.0kb downstream 7077 true Chr1: 7982141-7989217 Arabidopsis thaliana
AT1G22600 5.0kb downstream 5.0kb downstream 5000 false Chr1: 7982141-7987140 Arabidopsis thaliana
AT1G22600 10.0kb upstream 10.0kb upstream 12077 true Chr1: 7987141-7999217 Arabidopsis thaliana
AT1G22600 10.0kb upstream 10.0kb upstream 10000 false Chr1: 7989218-7999217 Arabidopsis thaliana
AT1G22600 10.0kb downstream 10.0kb downstream 12077 true Chr1: 7977141-7989217 Arabidopsis thaliana
AT1G22600 10.0kb downstream 10.0kb downstream 10000 false Chr1: 7977141-7987140 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361396 5261 Brassicaceae View MSA
123798154 5264 Brassicales-Malvales View MSA
124295828 5266 SBM View MSA
124148158 5268 Malvidae View MSA
124072864 5270 Rosid View MSA
123741808 5271 Pentapetalae View MSA
122794616 5272 Eudicot View MSA
122045721 5273 Angiosperm View MSA
121349691 5274 Embryophyte View MSA
123428296 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.048     Low  
cufflinks 0.058     Low  
cufflinks 0.088     Low  
cufflinks 0.022     Low Low
cufflinks 0.093     Low High
cufflinks 0.038     Low  

0 Strain