Gene : AT1G22660 A. thaliana TAIR10
Defline:  (1 of 1) 2.7.7.72 - CCA tRNA nucleotidyltransferase / tRNA-nucleotidyltransferase Genomic Order:  2290
Name:  ? AT1G22660 Secondary Identifier:  ? PAC:19652193
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G22660 0.5kb upstream 0.5kb upstream 4816 true Chr1: 8016897-8021712 Arabidopsis thaliana
AT1G22660 0.5kb upstream 0.5kb upstream 500 false Chr1: 8016897-8017396 Arabidopsis thaliana
AT1G22660 0.5kb downstream 0.5kb downstream 4816 true Chr1: 8017397-8022212 Arabidopsis thaliana
AT1G22660 0.5kb downstream 0.5kb downstream 500 false Chr1: 8021713-8022212 Arabidopsis thaliana
AT1G22660 1.0kb upstream 1.0kb upstream 5316 true Chr1: 8016397-8021712 Arabidopsis thaliana
AT1G22660 1.0kb upstream 1.0kb upstream 1000 false Chr1: 8016397-8017396 Arabidopsis thaliana
AT1G22660 1.0kb downstream 1.0kb downstream 5316 true Chr1: 8017397-8022712 Arabidopsis thaliana
AT1G22660 1.0kb downstream 1.0kb downstream 1000 false Chr1: 8021713-8022712 Arabidopsis thaliana
AT1G22660 2.0kb upstream 2.0kb upstream 6316 true Chr1: 8015397-8021712 Arabidopsis thaliana
AT1G22660 2.0kb upstream 2.0kb upstream 2000 false Chr1: 8015397-8017396 Arabidopsis thaliana
AT1G22660 2.0kb downstream 2.0kb downstream 6316 true Chr1: 8017397-8023712 Arabidopsis thaliana
AT1G22660 2.0kb downstream 2.0kb downstream 2000 false Chr1: 8021713-8023712 Arabidopsis thaliana
AT1G22660 5.0kb upstream 5.0kb upstream 9316 true Chr1: 8012397-8021712 Arabidopsis thaliana
AT1G22660 5.0kb upstream 5.0kb upstream 5000 false Chr1: 8012397-8017396 Arabidopsis thaliana
AT1G22660 5.0kb downstream 5.0kb downstream 9316 true Chr1: 8017397-8026712 Arabidopsis thaliana
AT1G22660 5.0kb downstream 5.0kb downstream 5000 false Chr1: 8021713-8026712 Arabidopsis thaliana
AT1G22660 10.0kb upstream 10.0kb upstream 14316 true Chr1: 8007397-8021712 Arabidopsis thaliana
AT1G22660 10.0kb upstream 10.0kb upstream 10000 false Chr1: 8007397-8017396 Arabidopsis thaliana
AT1G22660 10.0kb downstream 10.0kb downstream 14316 true Chr1: 8017397-8031712 Arabidopsis thaliana
AT1G22660 10.0kb downstream 10.0kb downstream 10000 false Chr1: 8021713-8031712 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369085 5261 Brassicaceae View MSA
123829836 5264 Brassicales-Malvales View MSA
124346152 5266 SBM View MSA
124241226 5268 Malvidae View MSA
124064235 5270 Rosid View MSA
123751527 5271 Pentapetalae View MSA
122793185 5272 Eudicot View MSA
122043482 5273 Angiosperm View MSA
121344625 5274 Embryophyte View MSA
123428724 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.353       Low
cufflinks 1.893       High
cufflinks 1.385        
cufflinks 1.828       High
cufflinks 1.488        
cufflinks 1.515        

0 Strain