Gene : AT1G65070 A. thaliana TAIR10
Defline:  (1 of 1) K07456 - DNA mismatch repair protein MutS2 (mutS2) Genomic Order:  5432
Name:  ? AT1G65070 Secondary Identifier:  ? PAC:19651521
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G65070 0.5kb upstream 0.5kb upstream 3912 true Chr1: 24172899-24176810 Arabidopsis thaliana
AT1G65070 0.5kb upstream 0.5kb upstream 500 false Chr1: 24176311-24176810 Arabidopsis thaliana
AT1G65070 0.5kb downstream 0.5kb downstream 3912 true Chr1: 24172399-24176310 Arabidopsis thaliana
AT1G65070 0.5kb downstream 0.5kb downstream 500 false Chr1: 24172399-24172898 Arabidopsis thaliana
AT1G65070 1.0kb upstream 1.0kb upstream 4412 true Chr1: 24172899-24177310 Arabidopsis thaliana
AT1G65070 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24176311-24177310 Arabidopsis thaliana
AT1G65070 1.0kb downstream 1.0kb downstream 4412 true Chr1: 24171899-24176310 Arabidopsis thaliana
AT1G65070 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24171899-24172898 Arabidopsis thaliana
AT1G65070 2.0kb upstream 2.0kb upstream 5412 true Chr1: 24172899-24178310 Arabidopsis thaliana
AT1G65070 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24176311-24178310 Arabidopsis thaliana
AT1G65070 2.0kb downstream 2.0kb downstream 5412 true Chr1: 24170899-24176310 Arabidopsis thaliana
AT1G65070 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24170899-24172898 Arabidopsis thaliana
AT1G65070 5.0kb upstream 5.0kb upstream 8412 true Chr1: 24172899-24181310 Arabidopsis thaliana
AT1G65070 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24176311-24181310 Arabidopsis thaliana
AT1G65070 5.0kb downstream 5.0kb downstream 8412 true Chr1: 24167899-24176310 Arabidopsis thaliana
AT1G65070 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24167899-24172898 Arabidopsis thaliana
AT1G65070 10.0kb upstream 10.0kb upstream 13412 true Chr1: 24172899-24186310 Arabidopsis thaliana
AT1G65070 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24176311-24186310 Arabidopsis thaliana
AT1G65070 10.0kb downstream 10.0kb downstream 13412 true Chr1: 24162899-24176310 Arabidopsis thaliana
AT1G65070 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24162899-24172898 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360294 5261 Brassicaceae View MSA
123827649 5264 Brassicales-Malvales View MSA
124340405 5266 SBM View MSA
124239742 5268 Malvidae View MSA
124073530 5270 Rosid View MSA
123739589 5271 Pentapetalae View MSA
122790305 5272 Eudicot View MSA
122044988 5273 Angiosperm View MSA
121346721 5274 Embryophyte View MSA
123426571 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.293       High
cufflinks 3.396        
cufflinks 5.296       High
cufflinks 3.001        
cufflinks 4.024        
cufflinks 2.72       Low

0 Strain