Gene : AT1G64880 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13718//PTHR13718:SF63 - RIBOSOMAL S SUBUNIT // SUBFAMILY NOT NAMED Genomic Order:  5412
Name:  ? AT1G64880 Secondary Identifier:  ? PAC:19652980
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G64880 0.5kb upstream 0.5kb upstream 4005 true Chr1: 24105142-24109146 Arabidopsis thaliana
AT1G64880 0.5kb upstream 0.5kb upstream 500 false Chr1: 24105142-24105641 Arabidopsis thaliana
AT1G64880 0.5kb downstream 0.5kb downstream 4005 true Chr1: 24105642-24109646 Arabidopsis thaliana
AT1G64880 0.5kb downstream 0.5kb downstream 500 false Chr1: 24109147-24109646 Arabidopsis thaliana
AT1G64880 1.0kb upstream 1.0kb upstream 4505 true Chr1: 24104642-24109146 Arabidopsis thaliana
AT1G64880 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24104642-24105641 Arabidopsis thaliana
AT1G64880 1.0kb downstream 1.0kb downstream 4505 true Chr1: 24105642-24110146 Arabidopsis thaliana
AT1G64880 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24109147-24110146 Arabidopsis thaliana
AT1G64880 2.0kb upstream 2.0kb upstream 5505 true Chr1: 24103642-24109146 Arabidopsis thaliana
AT1G64880 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24103642-24105641 Arabidopsis thaliana
AT1G64880 2.0kb downstream 2.0kb downstream 5505 true Chr1: 24105642-24111146 Arabidopsis thaliana
AT1G64880 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24109147-24111146 Arabidopsis thaliana
AT1G64880 5.0kb upstream 5.0kb upstream 8505 true Chr1: 24100642-24109146 Arabidopsis thaliana
AT1G64880 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24100642-24105641 Arabidopsis thaliana
AT1G64880 5.0kb downstream 5.0kb downstream 8505 true Chr1: 24105642-24114146 Arabidopsis thaliana
AT1G64880 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24109147-24114146 Arabidopsis thaliana
AT1G64880 10.0kb upstream 10.0kb upstream 13505 true Chr1: 24095642-24109146 Arabidopsis thaliana
AT1G64880 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24095642-24105641 Arabidopsis thaliana
AT1G64880 10.0kb downstream 10.0kb downstream 13505 true Chr1: 24105642-24119146 Arabidopsis thaliana
AT1G64880 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24109147-24119146 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365298 5261 Brassicaceae View MSA
123834053 5264 Brassicales-Malvales View MSA
124342927 5266 SBM View MSA
124237635 5268 Malvidae View MSA
124063452 5270 Rosid View MSA
123741085 5271 Pentapetalae View MSA
122790036 5272 Eudicot View MSA
122044726 5273 Angiosperm View MSA
121349200 5274 Embryophyte View MSA
123426297 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.69        
cufflinks 20.462        
cufflinks 17.717        
cufflinks 24.782        
cufflinks 13.839       Low
cufflinks 26.084       High

0 Strain