Gene : AT1G64530 A. thaliana TAIR10
Defline:  (1 of 2) PTHR32002:SF4 - PROTEIN NLP6-RELATED Genomic Order:  5374
Name:  ? AT1G64530 Secondary Identifier:  ? PAC:19652604
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G64530 0.5kb upstream 0.5kb upstream 3921 true Chr1: 23959161-23963081 Arabidopsis thaliana
AT1G64530 0.5kb upstream 0.5kb upstream 500 false Chr1: 23959161-23959660 Arabidopsis thaliana
AT1G64530 0.5kb downstream 0.5kb downstream 3921 true Chr1: 23959661-23963581 Arabidopsis thaliana
AT1G64530 0.5kb downstream 0.5kb downstream 500 false Chr1: 23963082-23963581 Arabidopsis thaliana
AT1G64530 1.0kb upstream 1.0kb upstream 4421 true Chr1: 23958661-23963081 Arabidopsis thaliana
AT1G64530 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23958661-23959660 Arabidopsis thaliana
AT1G64530 1.0kb downstream 1.0kb downstream 4421 true Chr1: 23959661-23964081 Arabidopsis thaliana
AT1G64530 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23963082-23964081 Arabidopsis thaliana
AT1G64530 2.0kb upstream 2.0kb upstream 5421 true Chr1: 23957661-23963081 Arabidopsis thaliana
AT1G64530 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23957661-23959660 Arabidopsis thaliana
AT1G64530 2.0kb downstream 2.0kb downstream 5421 true Chr1: 23959661-23965081 Arabidopsis thaliana
AT1G64530 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23963082-23965081 Arabidopsis thaliana
AT1G64530 5.0kb upstream 5.0kb upstream 8421 true Chr1: 23954661-23963081 Arabidopsis thaliana
AT1G64530 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23954661-23959660 Arabidopsis thaliana
AT1G64530 5.0kb downstream 5.0kb downstream 8421 true Chr1: 23959661-23968081 Arabidopsis thaliana
AT1G64530 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23963082-23968081 Arabidopsis thaliana
AT1G64530 10.0kb upstream 10.0kb upstream 13421 true Chr1: 23949661-23963081 Arabidopsis thaliana
AT1G64530 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23949661-23959660 Arabidopsis thaliana
AT1G64530 10.0kb downstream 10.0kb downstream 13421 true Chr1: 23959661-23973081 Arabidopsis thaliana
AT1G64530 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23963082-23973081 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040942 5273 Angiosperm View MSA
122366717 5261 Brassicaceae View MSA
123799231 5264 Brassicales-Malvales View MSA
124296777 5266 SBM View MSA
124148834 5268 Malvidae View MSA
123874754 5270 Rosid View MSA
123458682 5271 Pentapetalae View MSA
122494082 5272 Eudicot View MSA
121350940 5274 Embryophyte View MSA
123428170 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.704        
cufflinks 28.161        
cufflinks 1.645        
cufflinks 25.359        
cufflinks 1.902        
cufflinks 29.153        

0 Strain