Gene : UBC28 A. thaliana TAIR10
Primary Identifier:  ? AT1G64230 Defline:  (1 of 12) K06689 - ubiquitin-conjugating enzyme E2 D/E (UBE2D_E, UBC4, UBC5)
Genomic Order:  5343 Name:  ? AT1G64230
Secondary Identifier:  ? PAC:19655598
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7511 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G64230 0.5kb upstream 0.5kb upstream 2486 true Chr1: 23833051-23835536 Arabidopsis thaliana
AT1G64230 0.5kb upstream 0.5kb upstream 500 false Chr1: 23833051-23833550 Arabidopsis thaliana
AT1G64230 0.5kb downstream 0.5kb downstream 2486 true Chr1: 23833551-23836036 Arabidopsis thaliana
AT1G64230 0.5kb downstream 0.5kb downstream 500 false Chr1: 23835537-23836036 Arabidopsis thaliana
AT1G64230 1.0kb upstream 1.0kb upstream 2986 true Chr1: 23832551-23835536 Arabidopsis thaliana
AT1G64230 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23832551-23833550 Arabidopsis thaliana
AT1G64230 1.0kb downstream 1.0kb downstream 2986 true Chr1: 23833551-23836536 Arabidopsis thaliana
AT1G64230 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23835537-23836536 Arabidopsis thaliana
AT1G64230 2.0kb upstream 2.0kb upstream 3986 true Chr1: 23831551-23835536 Arabidopsis thaliana
AT1G64230 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23831551-23833550 Arabidopsis thaliana
AT1G64230 2.0kb downstream 2.0kb downstream 3986 true Chr1: 23833551-23837536 Arabidopsis thaliana
AT1G64230 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23835537-23837536 Arabidopsis thaliana
AT1G64230 5.0kb upstream 5.0kb upstream 6986 true Chr1: 23828551-23835536 Arabidopsis thaliana
AT1G64230 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23828551-23833550 Arabidopsis thaliana
AT1G64230 5.0kb downstream 5.0kb downstream 6986 true Chr1: 23833551-23840536 Arabidopsis thaliana
AT1G64230 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23835537-23840536 Arabidopsis thaliana
AT1G64230 10.0kb upstream 10.0kb upstream 11986 true Chr1: 23823551-23835536 Arabidopsis thaliana
AT1G64230 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23823551-23833550 Arabidopsis thaliana
AT1G64230 10.0kb downstream 10.0kb downstream 11986 true Chr1: 23833551-23845536 Arabidopsis thaliana
AT1G64230 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23835537-23845536 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344193 5261 Brassicaceae View MSA
123784234 5264 Brassicales-Malvales View MSA
124282430 5266 SBM View MSA
124137039 5268 Malvidae View MSA
123864813 5270 Rosid View MSA
123751143 5271 Pentapetalae View MSA
122796795 5272 Eudicot View MSA
122049643 5273 Angiosperm View MSA
121351650 5274 Embryophyte View MSA
123428086 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.296       Low
cufflinks 45.367     High High
cufflinks 29.635     High  
cufflinks 40.1     High  
cufflinks 28.688     High  
cufflinks 39.933     High  

0 Strain