Gene : AT1G63670 A. thaliana TAIR10
Defline:  (1 of 1) PTHR21726//PTHR21726:SF38 - PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED // PROTEIN TRM32 Genomic Order:  5285
Name:  ? AT1G63670 Secondary Identifier:  ? PAC:19657838
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G63670 0.5kb upstream 0.5kb upstream 3732 true Chr1: 23607422-23611153 Arabidopsis thaliana
AT1G63670 0.5kb upstream 0.5kb upstream 500 false Chr1: 23610654-23611153 Arabidopsis thaliana
AT1G63670 0.5kb downstream 0.5kb downstream 3732 true Chr1: 23606922-23610653 Arabidopsis thaliana
AT1G63670 0.5kb downstream 0.5kb downstream 500 false Chr1: 23606922-23607421 Arabidopsis thaliana
AT1G63670 1.0kb upstream 1.0kb upstream 4232 true Chr1: 23607422-23611653 Arabidopsis thaliana
AT1G63670 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23610654-23611653 Arabidopsis thaliana
AT1G63670 1.0kb downstream 1.0kb downstream 4232 true Chr1: 23606422-23610653 Arabidopsis thaliana
AT1G63670 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23606422-23607421 Arabidopsis thaliana
AT1G63670 2.0kb upstream 2.0kb upstream 5232 true Chr1: 23607422-23612653 Arabidopsis thaliana
AT1G63670 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23610654-23612653 Arabidopsis thaliana
AT1G63670 2.0kb downstream 2.0kb downstream 5232 true Chr1: 23605422-23610653 Arabidopsis thaliana
AT1G63670 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23605422-23607421 Arabidopsis thaliana
AT1G63670 5.0kb upstream 5.0kb upstream 8232 true Chr1: 23607422-23615653 Arabidopsis thaliana
AT1G63670 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23610654-23615653 Arabidopsis thaliana
AT1G63670 5.0kb downstream 5.0kb downstream 8232 true Chr1: 23602422-23610653 Arabidopsis thaliana
AT1G63670 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23602422-23607421 Arabidopsis thaliana
AT1G63670 10.0kb upstream 10.0kb upstream 13232 true Chr1: 23607422-23620653 Arabidopsis thaliana
AT1G63670 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23610654-23620653 Arabidopsis thaliana
AT1G63670 10.0kb downstream 10.0kb downstream 13232 true Chr1: 23597422-23610653 Arabidopsis thaliana
AT1G63670 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23597422-23607421 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374780 5261 Brassicaceae View MSA
123837222 5264 Brassicales-Malvales View MSA
124322264 5266 SBM View MSA
124250256 5268 Malvidae View MSA
124071904 5270 Rosid View MSA
123753280 5271 Pentapetalae View MSA
122795143 5272 Eudicot View MSA
122044494 5273 Angiosperm View MSA
121350314 5274 Embryophyte View MSA
123381675 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.947        
cufflinks 5.904        
cufflinks 2.6        
cufflinks 5.203        
cufflinks 1.93       Low
cufflinks 5.802        

0 Strain