Gene : HMA5 A. thaliana TAIR10
Primary Identifier:  ? AT1G63440 Defline:  (1 of 2) K17686 - Cu+-exporting ATPase (copA, ATP7)
Genomic Order:  5262 Name:  ? AT1G63440
Secondary Identifier:  ? PAC:19650287
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G63440 0.5kb upstream 0.5kb upstream 3955 true Chr1: 23527155-23531109 Arabidopsis thaliana
AT1G63440 0.5kb upstream 0.5kb upstream 500 false Chr1: 23527155-23527654 Arabidopsis thaliana
AT1G63440 0.5kb downstream 0.5kb downstream 3955 true Chr1: 23527655-23531609 Arabidopsis thaliana
AT1G63440 0.5kb downstream 0.5kb downstream 500 false Chr1: 23531110-23531609 Arabidopsis thaliana
AT1G63440 1.0kb upstream 1.0kb upstream 4455 true Chr1: 23526655-23531109 Arabidopsis thaliana
AT1G63440 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23526655-23527654 Arabidopsis thaliana
AT1G63440 1.0kb downstream 1.0kb downstream 4455 true Chr1: 23527655-23532109 Arabidopsis thaliana
AT1G63440 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23531110-23532109 Arabidopsis thaliana
AT1G63440 2.0kb upstream 2.0kb upstream 5455 true Chr1: 23525655-23531109 Arabidopsis thaliana
AT1G63440 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23525655-23527654 Arabidopsis thaliana
AT1G63440 2.0kb downstream 2.0kb downstream 5455 true Chr1: 23527655-23533109 Arabidopsis thaliana
AT1G63440 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23531110-23533109 Arabidopsis thaliana
AT1G63440 5.0kb upstream 5.0kb upstream 8455 true Chr1: 23522655-23531109 Arabidopsis thaliana
AT1G63440 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23522655-23527654 Arabidopsis thaliana
AT1G63440 5.0kb downstream 5.0kb downstream 8455 true Chr1: 23527655-23536109 Arabidopsis thaliana
AT1G63440 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23531110-23536109 Arabidopsis thaliana
AT1G63440 10.0kb upstream 10.0kb upstream 13455 true Chr1: 23517655-23531109 Arabidopsis thaliana
AT1G63440 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23517655-23527654 Arabidopsis thaliana
AT1G63440 10.0kb downstream 10.0kb downstream 13455 true Chr1: 23527655-23541109 Arabidopsis thaliana
AT1G63440 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23531110-23541109 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369279 5261 Brassicaceae View MSA
123832751 5264 Brassicales-Malvales View MSA
124346158 5266 SBM View MSA
124242737 5268 Malvidae View MSA
124069663 5270 Rosid View MSA
123747003 5271 Pentapetalae View MSA
122794490 5272 Eudicot View MSA
122042760 5273 Angiosperm View MSA
121351146 5274 Embryophyte View MSA
123426796 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.967       Low
cufflinks 14.996        
cufflinks 1.216        
cufflinks 18.449        
cufflinks 1.468        
cufflinks 18.062        

0 Strain