Gene : AT1G63420 A. thaliana TAIR10
Defline:  (1 of 3) PTHR12203//PTHR12203:SF32 - KDEL LYS-ASP-GLU-LEU CONTAINING - RELATED // SUBFAMILY NOT NAMED Genomic Order:  5260
Name:  ? AT1G63420 Secondary Identifier:  ? PAC:19651262
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G63420 0.5kb upstream 0.5kb upstream 3537 true Chr1: 23515374-23518910 Arabidopsis thaliana
AT1G63420 0.5kb upstream 0.5kb upstream 500 false Chr1: 23515374-23515873 Arabidopsis thaliana
AT1G63420 0.5kb downstream 0.5kb downstream 3537 true Chr1: 23515874-23519410 Arabidopsis thaliana
AT1G63420 0.5kb downstream 0.5kb downstream 500 false Chr1: 23518911-23519410 Arabidopsis thaliana
AT1G63420 1.0kb upstream 1.0kb upstream 4037 true Chr1: 23514874-23518910 Arabidopsis thaliana
AT1G63420 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23514874-23515873 Arabidopsis thaliana
AT1G63420 1.0kb downstream 1.0kb downstream 4037 true Chr1: 23515874-23519910 Arabidopsis thaliana
AT1G63420 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23518911-23519910 Arabidopsis thaliana
AT1G63420 2.0kb upstream 2.0kb upstream 5037 true Chr1: 23513874-23518910 Arabidopsis thaliana
AT1G63420 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23513874-23515873 Arabidopsis thaliana
AT1G63420 2.0kb downstream 2.0kb downstream 5037 true Chr1: 23515874-23520910 Arabidopsis thaliana
AT1G63420 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23518911-23520910 Arabidopsis thaliana
AT1G63420 5.0kb upstream 5.0kb upstream 8037 true Chr1: 23510874-23518910 Arabidopsis thaliana
AT1G63420 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23510874-23515873 Arabidopsis thaliana
AT1G63420 5.0kb downstream 5.0kb downstream 8037 true Chr1: 23515874-23523910 Arabidopsis thaliana
AT1G63420 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23518911-23523910 Arabidopsis thaliana
AT1G63420 10.0kb upstream 10.0kb upstream 13037 true Chr1: 23505874-23518910 Arabidopsis thaliana
AT1G63420 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23505874-23515873 Arabidopsis thaliana
AT1G63420 10.0kb downstream 10.0kb downstream 13037 true Chr1: 23515874-23528910 Arabidopsis thaliana
AT1G63420 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23518911-23528910 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368105 5261 Brassicaceae View MSA
123838009 5264 Brassicales-Malvales View MSA
124347347 5266 SBM View MSA
124249956 5268 Malvidae View MSA
124071694 5270 Rosid View MSA
123749767 5271 Pentapetalae View MSA
122786856 5272 Eudicot View MSA
122044328 5273 Angiosperm View MSA
121310279 5274 Embryophyte View MSA
123428833 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.739       Low
cufflinks 24.28       High
cufflinks 12.613        
cufflinks 22.879        
cufflinks 11.722        
cufflinks 19.536        

0 Strain