Gene : AT1G63150 A. thaliana TAIR10
Defline:  (1 of 12) PTHR24015//PTHR24015:SF884 - FAMILY NOT NAMED // PENTATRICOPEPTIDE (PPR) REPEAT-CONTAINING PROTEIN Genomic Order:  5229
Name:  ? AT1G63150 Secondary Identifier:  ? PAC:19657780
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G63150 0.5kb upstream 0.5kb upstream 2684 true Chr1: 23418896-23421579 Arabidopsis thaliana
AT1G63150 0.5kb upstream 0.5kb upstream 500 false Chr1: 23418896-23419395 Arabidopsis thaliana
AT1G63150 0.5kb downstream 0.5kb downstream 2684 true Chr1: 23419396-23422079 Arabidopsis thaliana
AT1G63150 0.5kb downstream 0.5kb downstream 500 false Chr1: 23421580-23422079 Arabidopsis thaliana
AT1G63150 1.0kb upstream 1.0kb upstream 3184 true Chr1: 23418396-23421579 Arabidopsis thaliana
AT1G63150 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23418396-23419395 Arabidopsis thaliana
AT1G63150 1.0kb downstream 1.0kb downstream 3184 true Chr1: 23419396-23422579 Arabidopsis thaliana
AT1G63150 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23421580-23422579 Arabidopsis thaliana
AT1G63150 2.0kb upstream 2.0kb upstream 4184 true Chr1: 23417396-23421579 Arabidopsis thaliana
AT1G63150 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23417396-23419395 Arabidopsis thaliana
AT1G63150 2.0kb downstream 2.0kb downstream 4184 true Chr1: 23419396-23423579 Arabidopsis thaliana
AT1G63150 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23421580-23423579 Arabidopsis thaliana
AT1G63150 5.0kb upstream 5.0kb upstream 7184 true Chr1: 23414396-23421579 Arabidopsis thaliana
AT1G63150 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23414396-23419395 Arabidopsis thaliana
AT1G63150 5.0kb downstream 5.0kb downstream 7184 true Chr1: 23419396-23426579 Arabidopsis thaliana
AT1G63150 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23421580-23426579 Arabidopsis thaliana
AT1G63150 10.0kb upstream 10.0kb upstream 12184 true Chr1: 23409396-23421579 Arabidopsis thaliana
AT1G63150 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23409396-23419395 Arabidopsis thaliana
AT1G63150 10.0kb downstream 10.0kb downstream 12184 true Chr1: 23419396-23431579 Arabidopsis thaliana
AT1G63150 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23421580-23431579 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378647 5261 Brassicaceae View MSA
123841436 5264 Brassicales-Malvales View MSA
124350672 5266 SBM View MSA
124254642 5268 Malvidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.48        
cufflinks 1.395        
cufflinks 1.426        
cufflinks 1.416        
cufflinks 1.131       Low
cufflinks 1.463        

0 Strain