Gene : AT1G62970 A. thaliana TAIR10
Defline:  (1 of 3) PTHR24078:SF259 - CHAPERONE DNAJ-DOMAIN CONTAINING PROTEIN Genomic Order:  5206
Name:  ? AT1G62970 Secondary Identifier:  ? PAC:19657518
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G62970 0.5kb upstream 0.5kb upstream 3237 true Chr1: 23322817-23326053 Arabidopsis thaliana
AT1G62970 0.5kb upstream 0.5kb upstream 500 false Chr1: 23322817-23323316 Arabidopsis thaliana
AT1G62970 0.5kb downstream 0.5kb downstream 3237 true Chr1: 23323317-23326553 Arabidopsis thaliana
AT1G62970 0.5kb downstream 0.5kb downstream 500 false Chr1: 23326054-23326553 Arabidopsis thaliana
AT1G62970 1.0kb upstream 1.0kb upstream 3737 true Chr1: 23322317-23326053 Arabidopsis thaliana
AT1G62970 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23322317-23323316 Arabidopsis thaliana
AT1G62970 1.0kb downstream 1.0kb downstream 3737 true Chr1: 23323317-23327053 Arabidopsis thaliana
AT1G62970 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23326054-23327053 Arabidopsis thaliana
AT1G62970 2.0kb upstream 2.0kb upstream 4737 true Chr1: 23321317-23326053 Arabidopsis thaliana
AT1G62970 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23321317-23323316 Arabidopsis thaliana
AT1G62970 2.0kb downstream 2.0kb downstream 4737 true Chr1: 23323317-23328053 Arabidopsis thaliana
AT1G62970 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23326054-23328053 Arabidopsis thaliana
AT1G62970 5.0kb upstream 5.0kb upstream 7737 true Chr1: 23318317-23326053 Arabidopsis thaliana
AT1G62970 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23318317-23323316 Arabidopsis thaliana
AT1G62970 5.0kb downstream 5.0kb downstream 7737 true Chr1: 23323317-23331053 Arabidopsis thaliana
AT1G62970 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23326054-23331053 Arabidopsis thaliana
AT1G62970 10.0kb upstream 10.0kb upstream 12737 true Chr1: 23313317-23326053 Arabidopsis thaliana
AT1G62970 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23313317-23323316 Arabidopsis thaliana
AT1G62970 10.0kb downstream 10.0kb downstream 12737 true Chr1: 23323317-23336053 Arabidopsis thaliana
AT1G62970 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23326054-23336053 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364068 5261 Brassicaceae View MSA
123798678 5264 Brassicales-Malvales View MSA
124296285 5266 SBM View MSA
124253304 5268 Malvidae View MSA
124074016 5270 Rosid View MSA
123741579 5271 Pentapetalae View MSA
122797232 5272 Eudicot View MSA
122050923 5273 Angiosperm View MSA
123429067 5275 Viridiplantae View MSA
121349574 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.136        
cufflinks 6.557        
cufflinks 2.377       Low
cufflinks 7.96       High
cufflinks 3.005        
cufflinks 7.049        

0 Strain