Gene : AT1G62981 A. thaliana TAIR10
Defline:  (1 of 2) PTHR33512//PTHR33512:SF2 - FAMILY NOT NAMED // F16P17.15 Genomic Order:  5210
Name:  ? AT1G62981 Secondary Identifier:  ? PAC:19654982
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G62981 0.5kb upstream 0.5kb upstream 2264 true Chr1: 23333132-23335395 Arabidopsis thaliana
AT1G62981 0.5kb upstream 0.5kb upstream 500 false Chr1: 23333132-23333631 Arabidopsis thaliana
AT1G62981 0.5kb downstream 0.5kb downstream 2264 true Chr1: 23333632-23335895 Arabidopsis thaliana
AT1G62981 0.5kb downstream 0.5kb downstream 500 false Chr1: 23335396-23335895 Arabidopsis thaliana
AT1G62981 1.0kb upstream 1.0kb upstream 2764 true Chr1: 23332632-23335395 Arabidopsis thaliana
AT1G62981 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23332632-23333631 Arabidopsis thaliana
AT1G62981 1.0kb downstream 1.0kb downstream 2764 true Chr1: 23333632-23336395 Arabidopsis thaliana
AT1G62981 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23335396-23336395 Arabidopsis thaliana
AT1G62981 2.0kb upstream 2.0kb upstream 3764 true Chr1: 23331632-23335395 Arabidopsis thaliana
AT1G62981 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23331632-23333631 Arabidopsis thaliana
AT1G62981 2.0kb downstream 2.0kb downstream 3764 true Chr1: 23333632-23337395 Arabidopsis thaliana
AT1G62981 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23335396-23337395 Arabidopsis thaliana
AT1G62981 5.0kb upstream 5.0kb upstream 6764 true Chr1: 23328632-23335395 Arabidopsis thaliana
AT1G62981 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23328632-23333631 Arabidopsis thaliana
AT1G62981 5.0kb downstream 5.0kb downstream 6764 true Chr1: 23333632-23340395 Arabidopsis thaliana
AT1G62981 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23335396-23340395 Arabidopsis thaliana
AT1G62981 10.0kb upstream 10.0kb upstream 11764 true Chr1: 23323632-23335395 Arabidopsis thaliana
AT1G62981 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23323632-23333631 Arabidopsis thaliana
AT1G62981 10.0kb downstream 10.0kb downstream 11764 true Chr1: 23333632-23345395 Arabidopsis thaliana
AT1G62981 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23335396-23345395 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370158 5261 Brassicaceae View MSA
123799911 5264 Brassicales-Malvales View MSA
124347177 5266 SBM View MSA
124244151 5268 Malvidae View MSA
124063099 5270 Rosid View MSA
123739711 5271 Pentapetalae View MSA
122787000 5272 Eudicot View MSA
122049510 5273 Angiosperm View MSA
121311447 5274 Embryophyte View MSA
123348742 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.313        
cufflinks 0.419        
cufflinks 0.342        
cufflinks 0.647        
cufflinks 0.201     Low Low
cufflinks 0.772       High

0 Strain