Gene : AT1G62740 A. thaliana TAIR10
Defline:  (1 of 3) K09553 - stress-induced-phosphoprotein 1 (STIP1) Genomic Order:  5181
Name:  ? AT1G62740 Secondary Identifier:  ? PAC:19651302
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G62740 0.5kb upstream 0.5kb upstream 3088 true Chr1: 23230456-23233543 Arabidopsis thaliana
AT1G62740 0.5kb upstream 0.5kb upstream 500 false Chr1: 23230456-23230955 Arabidopsis thaliana
AT1G62740 0.5kb downstream 0.5kb downstream 3088 true Chr1: 23230956-23234043 Arabidopsis thaliana
AT1G62740 0.5kb downstream 0.5kb downstream 500 false Chr1: 23233544-23234043 Arabidopsis thaliana
AT1G62740 1.0kb upstream 1.0kb upstream 3588 true Chr1: 23229956-23233543 Arabidopsis thaliana
AT1G62740 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23229956-23230955 Arabidopsis thaliana
AT1G62740 1.0kb downstream 1.0kb downstream 3588 true Chr1: 23230956-23234543 Arabidopsis thaliana
AT1G62740 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23233544-23234543 Arabidopsis thaliana
AT1G62740 2.0kb upstream 2.0kb upstream 4588 true Chr1: 23228956-23233543 Arabidopsis thaliana
AT1G62740 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23228956-23230955 Arabidopsis thaliana
AT1G62740 2.0kb downstream 2.0kb downstream 4588 true Chr1: 23230956-23235543 Arabidopsis thaliana
AT1G62740 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23233544-23235543 Arabidopsis thaliana
AT1G62740 5.0kb upstream 5.0kb upstream 7588 true Chr1: 23225956-23233543 Arabidopsis thaliana
AT1G62740 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23225956-23230955 Arabidopsis thaliana
AT1G62740 5.0kb downstream 5.0kb downstream 7588 true Chr1: 23230956-23238543 Arabidopsis thaliana
AT1G62740 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23233544-23238543 Arabidopsis thaliana
AT1G62740 10.0kb upstream 10.0kb upstream 12588 true Chr1: 23220956-23233543 Arabidopsis thaliana
AT1G62740 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23220956-23230955 Arabidopsis thaliana
AT1G62740 10.0kb downstream 10.0kb downstream 12588 true Chr1: 23230956-23243543 Arabidopsis thaliana
AT1G62740 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23233544-23243543 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360655 5261 Brassicaceae View MSA
123838662 5264 Brassicales-Malvales View MSA
124336628 5266 SBM View MSA
124248162 5268 Malvidae View MSA
124050195 5270 Rosid View MSA
123742862 5271 Pentapetalae View MSA
122790391 5272 Eudicot View MSA
122044378 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121343980 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.334        
cufflinks 25.984        
cufflinks 20.467       Low
cufflinks 30.512     High High
cufflinks 21.254        
cufflinks 31.748     High High

0 Strain