Gene : AT1G62422 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31903:SF6 - F12F1.11-RELATED Genomic Order:  5152
Name:  ? AT1G62422 Secondary Identifier:  ? PAC:19652296
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G62422 0.5kb upstream 0.5kb upstream 1395 true Chr1: 23100139-23101533 Arabidopsis thaliana
AT1G62422 0.5kb upstream 0.5kb upstream 500 false Chr1: 23101034-23101533 Arabidopsis thaliana
AT1G62422 0.5kb downstream 0.5kb downstream 1395 true Chr1: 23099639-23101033 Arabidopsis thaliana
AT1G62422 0.5kb downstream 0.5kb downstream 500 false Chr1: 23099639-23100138 Arabidopsis thaliana
AT1G62422 1.0kb upstream 1.0kb upstream 1895 true Chr1: 23100139-23102033 Arabidopsis thaliana
AT1G62422 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23101034-23102033 Arabidopsis thaliana
AT1G62422 1.0kb downstream 1.0kb downstream 1895 true Chr1: 23099139-23101033 Arabidopsis thaliana
AT1G62422 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23099139-23100138 Arabidopsis thaliana
AT1G62422 2.0kb upstream 2.0kb upstream 2895 true Chr1: 23100139-23103033 Arabidopsis thaliana
AT1G62422 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23101034-23103033 Arabidopsis thaliana
AT1G62422 2.0kb downstream 2.0kb downstream 2895 true Chr1: 23098139-23101033 Arabidopsis thaliana
AT1G62422 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23098139-23100138 Arabidopsis thaliana
AT1G62422 5.0kb upstream 5.0kb upstream 5895 true Chr1: 23100139-23106033 Arabidopsis thaliana
AT1G62422 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23101034-23106033 Arabidopsis thaliana
AT1G62422 5.0kb downstream 5.0kb downstream 5895 true Chr1: 23095139-23101033 Arabidopsis thaliana
AT1G62422 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23095139-23100138 Arabidopsis thaliana
AT1G62422 10.0kb upstream 10.0kb upstream 10895 true Chr1: 23100139-23111033 Arabidopsis thaliana
AT1G62422 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23101034-23111033 Arabidopsis thaliana
AT1G62422 10.0kb downstream 10.0kb downstream 10895 true Chr1: 23090139-23101033 Arabidopsis thaliana
AT1G62422 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23090139-23100138 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375638 5261 Brassicaceae View MSA
123839342 5264 Brassicales-Malvales View MSA
124343761 5266 SBM View MSA
124247349 5268 Malvidae View MSA
124071789 5270 Rosid View MSA
123751715 5271 Pentapetalae View MSA
122793520 5272 Eudicot View MSA
122049689 5273 Angiosperm View MSA
121311543 5274 Embryophyte View MSA
123348826 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.85        
cufflinks 8.956        
cufflinks 18.281        
cufflinks 14.497        
cufflinks 20.544        
cufflinks 2.904       Low

0 Strain