Gene : AT1G62290 A. thaliana TAIR10
Defline:  (1 of 3) 3.4.23.40 - Phytepsin Genomic Order:  5135
Name:  ? AT1G62290 Secondary Identifier:  ? PAC:19653981
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G62290 0.5kb upstream 0.5kb upstream 4119 true Chr1: 23009911-23014029 Arabidopsis thaliana
AT1G62290 0.5kb upstream 0.5kb upstream 500 false Chr1: 23013530-23014029 Arabidopsis thaliana
AT1G62290 0.5kb downstream 0.5kb downstream 4119 true Chr1: 23009411-23013529 Arabidopsis thaliana
AT1G62290 0.5kb downstream 0.5kb downstream 500 false Chr1: 23009411-23009910 Arabidopsis thaliana
AT1G62290 1.0kb upstream 1.0kb upstream 4619 true Chr1: 23009911-23014529 Arabidopsis thaliana
AT1G62290 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23013530-23014529 Arabidopsis thaliana
AT1G62290 1.0kb downstream 1.0kb downstream 4619 true Chr1: 23008911-23013529 Arabidopsis thaliana
AT1G62290 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23008911-23009910 Arabidopsis thaliana
AT1G62290 2.0kb upstream 2.0kb upstream 5619 true Chr1: 23009911-23015529 Arabidopsis thaliana
AT1G62290 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23013530-23015529 Arabidopsis thaliana
AT1G62290 2.0kb downstream 2.0kb downstream 5619 true Chr1: 23007911-23013529 Arabidopsis thaliana
AT1G62290 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23007911-23009910 Arabidopsis thaliana
AT1G62290 5.0kb upstream 5.0kb upstream 8619 true Chr1: 23009911-23018529 Arabidopsis thaliana
AT1G62290 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23013530-23018529 Arabidopsis thaliana
AT1G62290 5.0kb downstream 5.0kb downstream 8619 true Chr1: 23004911-23013529 Arabidopsis thaliana
AT1G62290 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23004911-23009910 Arabidopsis thaliana
AT1G62290 10.0kb upstream 10.0kb upstream 13619 true Chr1: 23009911-23023529 Arabidopsis thaliana
AT1G62290 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23013530-23023529 Arabidopsis thaliana
AT1G62290 10.0kb downstream 10.0kb downstream 13619 true Chr1: 22999911-23013529 Arabidopsis thaliana
AT1G62290 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22999911-23009910 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122795495 5272 Eudicot View MSA
122366626 5261 Brassicaceae View MSA
123838779 5264 Brassicales-Malvales View MSA
124342622 5266 SBM View MSA
124253380 5268 Malvidae View MSA
124069001 5270 Rosid View MSA
123750418 5271 Pentapetalae View MSA
122045248 5273 Angiosperm View MSA
121346712 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.676        
cufflinks 0.652        
cufflinks 0.407       Low
cufflinks 0.937       High
cufflinks 0.725        
cufflinks 0.804        

0 Strain