Gene : LRX2 A. thaliana TAIR10
Primary Identifier:  ? AT1G62440 Defline:  (1 of 2) PTHR32093:SF40 - LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 1-RELATED
Genomic Order:  5155 Name:  ? AT1G62440
Secondary Identifier:  ? PAC:19649946
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G62440 0.5kb upstream 0.5kb upstream 3976 true Chr1: 23111318-23115293 Arabidopsis thaliana
AT1G62440 0.5kb upstream 0.5kb upstream 500 false Chr1: 23111318-23111817 Arabidopsis thaliana
AT1G62440 0.5kb downstream 0.5kb downstream 3976 true Chr1: 23111818-23115793 Arabidopsis thaliana
AT1G62440 0.5kb downstream 0.5kb downstream 500 false Chr1: 23115294-23115793 Arabidopsis thaliana
AT1G62440 1.0kb upstream 1.0kb upstream 4476 true Chr1: 23110818-23115293 Arabidopsis thaliana
AT1G62440 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23110818-23111817 Arabidopsis thaliana
AT1G62440 1.0kb downstream 1.0kb downstream 4476 true Chr1: 23111818-23116293 Arabidopsis thaliana
AT1G62440 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23115294-23116293 Arabidopsis thaliana
AT1G62440 2.0kb upstream 2.0kb upstream 5476 true Chr1: 23109818-23115293 Arabidopsis thaliana
AT1G62440 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23109818-23111817 Arabidopsis thaliana
AT1G62440 2.0kb downstream 2.0kb downstream 5476 true Chr1: 23111818-23117293 Arabidopsis thaliana
AT1G62440 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23115294-23117293 Arabidopsis thaliana
AT1G62440 5.0kb upstream 5.0kb upstream 8476 true Chr1: 23106818-23115293 Arabidopsis thaliana
AT1G62440 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23106818-23111817 Arabidopsis thaliana
AT1G62440 5.0kb downstream 5.0kb downstream 8476 true Chr1: 23111818-23120293 Arabidopsis thaliana
AT1G62440 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23115294-23120293 Arabidopsis thaliana
AT1G62440 10.0kb upstream 10.0kb upstream 13476 true Chr1: 23101818-23115293 Arabidopsis thaliana
AT1G62440 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23101818-23111817 Arabidopsis thaliana
AT1G62440 10.0kb downstream 10.0kb downstream 13476 true Chr1: 23111818-23125293 Arabidopsis thaliana
AT1G62440 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23115294-23125293 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375536 5261 Brassicaceae View MSA
123841495 5264 Brassicales-Malvales View MSA
124351661 5266 SBM View MSA
124254554 5268 Malvidae View MSA
124074520 5270 Rosid View MSA
123751287 5271 Pentapetalae View MSA
122794768 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.321        
cufflinks 0.416        
cufflinks 0.875        
cufflinks 1.075        
cufflinks 0.303        
cufflinks 2.312       High

0 Strain