Gene : ROH1 A. thaliana TAIR10
Primary Identifier:  ? AT1G63930 Defline:  (1 of 7) PF05633 - Protein of unknown function (DUF793) (DUF793)
Genomic Order:  5308 Name:  ? AT1G63930
Secondary Identifier:  ? PAC:19656440
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G63930 0.5kb upstream 0.5kb upstream 1943 true Chr1: 23727391-23729333 Arabidopsis thaliana
AT1G63930 0.5kb upstream 0.5kb upstream 500 false Chr1: 23727391-23727890 Arabidopsis thaliana
AT1G63930 0.5kb downstream 0.5kb downstream 1943 true Chr1: 23727891-23729833 Arabidopsis thaliana
AT1G63930 0.5kb downstream 0.5kb downstream 500 false Chr1: 23729334-23729833 Arabidopsis thaliana
AT1G63930 1.0kb upstream 1.0kb upstream 2443 true Chr1: 23726891-23729333 Arabidopsis thaliana
AT1G63930 1.0kb upstream 1.0kb upstream 1000 false Chr1: 23726891-23727890 Arabidopsis thaliana
AT1G63930 1.0kb downstream 1.0kb downstream 2443 true Chr1: 23727891-23730333 Arabidopsis thaliana
AT1G63930 1.0kb downstream 1.0kb downstream 1000 false Chr1: 23729334-23730333 Arabidopsis thaliana
AT1G63930 2.0kb upstream 2.0kb upstream 3443 true Chr1: 23725891-23729333 Arabidopsis thaliana
AT1G63930 2.0kb upstream 2.0kb upstream 2000 false Chr1: 23725891-23727890 Arabidopsis thaliana
AT1G63930 2.0kb downstream 2.0kb downstream 3443 true Chr1: 23727891-23731333 Arabidopsis thaliana
AT1G63930 2.0kb downstream 2.0kb downstream 2000 false Chr1: 23729334-23731333 Arabidopsis thaliana
AT1G63930 5.0kb upstream 5.0kb upstream 6443 true Chr1: 23722891-23729333 Arabidopsis thaliana
AT1G63930 5.0kb upstream 5.0kb upstream 5000 false Chr1: 23722891-23727890 Arabidopsis thaliana
AT1G63930 5.0kb downstream 5.0kb downstream 6443 true Chr1: 23727891-23734333 Arabidopsis thaliana
AT1G63930 5.0kb downstream 5.0kb downstream 5000 false Chr1: 23729334-23734333 Arabidopsis thaliana
AT1G63930 10.0kb upstream 10.0kb upstream 11443 true Chr1: 23717891-23729333 Arabidopsis thaliana
AT1G63930 10.0kb upstream 10.0kb upstream 10000 false Chr1: 23717891-23727890 Arabidopsis thaliana
AT1G63930 10.0kb downstream 10.0kb downstream 11443 true Chr1: 23727891-23739333 Arabidopsis thaliana
AT1G63930 10.0kb downstream 10.0kb downstream 10000 false Chr1: 23729334-23739333 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373255 5261 Brassicaceae View MSA
123840553 5264 Brassicales-Malvales View MSA
124341443 5266 SBM View MSA
124251504 5268 Malvidae View MSA
124065163 5270 Rosid View MSA
123741032 5271 Pentapetalae View MSA
122770001 5272 Eudicot View MSA
122049530 5273 Angiosperm View MSA
121311457 5274 Embryophyte View MSA
123348752 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.069     Low  
cufflinks 0.147     Low  
cufflinks 0.039     Low  
cufflinks 0.342     Low  
cufflinks 0.022     Low Low
cufflinks 0.451       High

0 Strain