Gene : AT1G61610 A. thaliana TAIR10
Defline:  (1 of 12) PF00954//PF01453//PF07714//PF08276 - S-locus glycoprotein domain (S_locus_glycop) // D-mannose binding lectin (B_lectin) // Protein tyrosine kinase (Pkinase_Tyr) // PAN-like domain (PAN_2) Genomic Order:  5067
Name:  ? AT1G61610 Secondary Identifier:  ? PAC:19657718
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G61610 0.5kb upstream 0.5kb upstream 3538 true Chr1: 22732972-22736509 Arabidopsis thaliana
AT1G61610 0.5kb upstream 0.5kb upstream 500 false Chr1: 22732972-22733471 Arabidopsis thaliana
AT1G61610 0.5kb downstream 0.5kb downstream 3538 true Chr1: 22733472-22737009 Arabidopsis thaliana
AT1G61610 0.5kb downstream 0.5kb downstream 500 false Chr1: 22736510-22737009 Arabidopsis thaliana
AT1G61610 1.0kb upstream 1.0kb upstream 4038 true Chr1: 22732472-22736509 Arabidopsis thaliana
AT1G61610 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22732472-22733471 Arabidopsis thaliana
AT1G61610 1.0kb downstream 1.0kb downstream 4038 true Chr1: 22733472-22737509 Arabidopsis thaliana
AT1G61610 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22736510-22737509 Arabidopsis thaliana
AT1G61610 2.0kb upstream 2.0kb upstream 5038 true Chr1: 22731472-22736509 Arabidopsis thaliana
AT1G61610 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22731472-22733471 Arabidopsis thaliana
AT1G61610 2.0kb downstream 2.0kb downstream 5038 true Chr1: 22733472-22738509 Arabidopsis thaliana
AT1G61610 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22736510-22738509 Arabidopsis thaliana
AT1G61610 5.0kb upstream 5.0kb upstream 8038 true Chr1: 22728472-22736509 Arabidopsis thaliana
AT1G61610 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22728472-22733471 Arabidopsis thaliana
AT1G61610 5.0kb downstream 5.0kb downstream 8038 true Chr1: 22733472-22741509 Arabidopsis thaliana
AT1G61610 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22736510-22741509 Arabidopsis thaliana
AT1G61610 10.0kb upstream 10.0kb upstream 13038 true Chr1: 22723472-22736509 Arabidopsis thaliana
AT1G61610 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22723472-22733471 Arabidopsis thaliana
AT1G61610 10.0kb downstream 10.0kb downstream 13038 true Chr1: 22733472-22746509 Arabidopsis thaliana
AT1G61610 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22736510-22746509 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378342 5261 Brassicaceae View MSA
123837958 5264 Brassicales-Malvales View MSA
124343429 5266 SBM View MSA
124242564 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.483        
cufflinks 16.65       High
cufflinks 2.936       Low
cufflinks 16.764       High
cufflinks 3.729        
cufflinks 8.378        

0 Strain