Gene : AT1G77220 A. thaliana TAIR10
Defline:  (1 of 1) PTHR23423//PTHR23423:SF27 - ORGANIC SOLUTE TRANSPORTER-RELATED // SUBFAMILY NOT NAMED Genomic Order:  6692
Name:  ? AT1G77220 Secondary Identifier:  ? PAC:19656947
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G77220 0.5kb upstream 0.5kb upstream 3587 true Chr1: 29012217-29015803 Arabidopsis thaliana
AT1G77220 0.5kb upstream 0.5kb upstream 500 false Chr1: 29012217-29012716 Arabidopsis thaliana
AT1G77220 0.5kb downstream 0.5kb downstream 3587 true Chr1: 29012717-29016303 Arabidopsis thaliana
AT1G77220 0.5kb downstream 0.5kb downstream 500 false Chr1: 29015804-29016303 Arabidopsis thaliana
AT1G77220 1.0kb upstream 1.0kb upstream 4087 true Chr1: 29011717-29015803 Arabidopsis thaliana
AT1G77220 1.0kb upstream 1.0kb upstream 1000 false Chr1: 29011717-29012716 Arabidopsis thaliana
AT1G77220 1.0kb downstream 1.0kb downstream 4087 true Chr1: 29012717-29016803 Arabidopsis thaliana
AT1G77220 1.0kb downstream 1.0kb downstream 1000 false Chr1: 29015804-29016803 Arabidopsis thaliana
AT1G77220 2.0kb upstream 2.0kb upstream 5087 true Chr1: 29010717-29015803 Arabidopsis thaliana
AT1G77220 2.0kb upstream 2.0kb upstream 2000 false Chr1: 29010717-29012716 Arabidopsis thaliana
AT1G77220 2.0kb downstream 2.0kb downstream 5087 true Chr1: 29012717-29017803 Arabidopsis thaliana
AT1G77220 2.0kb downstream 2.0kb downstream 2000 false Chr1: 29015804-29017803 Arabidopsis thaliana
AT1G77220 5.0kb upstream 5.0kb upstream 8087 true Chr1: 29007717-29015803 Arabidopsis thaliana
AT1G77220 5.0kb upstream 5.0kb upstream 5000 false Chr1: 29007717-29012716 Arabidopsis thaliana
AT1G77220 5.0kb downstream 5.0kb downstream 8087 true Chr1: 29012717-29020803 Arabidopsis thaliana
AT1G77220 5.0kb downstream 5.0kb downstream 5000 false Chr1: 29015804-29020803 Arabidopsis thaliana
AT1G77220 10.0kb upstream 10.0kb upstream 13087 true Chr1: 29002717-29015803 Arabidopsis thaliana
AT1G77220 10.0kb upstream 10.0kb upstream 10000 false Chr1: 29002717-29012716 Arabidopsis thaliana
AT1G77220 10.0kb downstream 10.0kb downstream 13087 true Chr1: 29012717-29025803 Arabidopsis thaliana
AT1G77220 10.0kb downstream 10.0kb downstream 10000 false Chr1: 29015804-29025803 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366343 5261 Brassicaceae View MSA
123830612 5264 Brassicales-Malvales View MSA
124336895 5266 SBM View MSA
124253341 5268 Malvidae View MSA
124066158 5270 Rosid View MSA
123753349 5271 Pentapetalae View MSA
122792951 5272 Eudicot View MSA
122047742 5273 Angiosperm View MSA
121350215 5274 Embryophyte View MSA
123427407 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.486        
cufflinks 12.29        
cufflinks 9.928       Low
cufflinks 12.07        
cufflinks 11.927        
cufflinks 10.287       Low

0 Strain