Gene : AT1G61210 A. thaliana TAIR10
Defline:  (1 of 2) PTHR19845:SF5 - KATANIN P80 WD40 REPEAT-CONTAINING SUBUNIT B1 HOMOLOG Genomic Order:  5022
Name:  ? AT1G61210 Secondary Identifier:  ? PAC:19651130
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G61210 0.5kb upstream 0.5kb upstream 7913 true Chr1: 22563995-22571907 Arabidopsis thaliana
AT1G61210 0.5kb upstream 0.5kb upstream 500 false Chr1: 22563995-22564494 Arabidopsis thaliana
AT1G61210 0.5kb downstream 0.5kb downstream 7913 true Chr1: 22564495-22572407 Arabidopsis thaliana
AT1G61210 0.5kb downstream 0.5kb downstream 500 false Chr1: 22571908-22572407 Arabidopsis thaliana
AT1G61210 1.0kb upstream 1.0kb upstream 8413 true Chr1: 22563495-22571907 Arabidopsis thaliana
AT1G61210 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22563495-22564494 Arabidopsis thaliana
AT1G61210 1.0kb downstream 1.0kb downstream 8413 true Chr1: 22564495-22572907 Arabidopsis thaliana
AT1G61210 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22571908-22572907 Arabidopsis thaliana
AT1G61210 2.0kb upstream 2.0kb upstream 9413 true Chr1: 22562495-22571907 Arabidopsis thaliana
AT1G61210 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22562495-22564494 Arabidopsis thaliana
AT1G61210 2.0kb downstream 2.0kb downstream 9413 true Chr1: 22564495-22573907 Arabidopsis thaliana
AT1G61210 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22571908-22573907 Arabidopsis thaliana
AT1G61210 5.0kb upstream 5.0kb upstream 12413 true Chr1: 22559495-22571907 Arabidopsis thaliana
AT1G61210 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22559495-22564494 Arabidopsis thaliana
AT1G61210 5.0kb downstream 5.0kb downstream 12413 true Chr1: 22564495-22576907 Arabidopsis thaliana
AT1G61210 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22571908-22576907 Arabidopsis thaliana
AT1G61210 10.0kb upstream 10.0kb upstream 17413 true Chr1: 22554495-22571907 Arabidopsis thaliana
AT1G61210 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22554495-22564494 Arabidopsis thaliana
AT1G61210 10.0kb downstream 10.0kb downstream 17413 true Chr1: 22564495-22581907 Arabidopsis thaliana
AT1G61210 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22571908-22581907 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369377 5261 Brassicaceae View MSA
123837633 5264 Brassicales-Malvales View MSA
124350797 5266 SBM View MSA
124240803 5268 Malvidae View MSA
124070795 5270 Rosid View MSA
123750232 5271 Pentapetalae View MSA
122791817 5272 Eudicot View MSA
122044503 5273 Angiosperm View MSA
121345721 5274 Embryophyte View MSA
123425332 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.911        
cufflinks 3.155        
cufflinks 1.69       Low
cufflinks 3.469       High
cufflinks 1.768        
cufflinks 3.401        

0 Strain