Gene : AT1G61240 A. thaliana TAIR10
Defline:  (1 of 11) PF05212 - Protein of unknown function (DUF707) (DUF707) Genomic Order:  5025
Name:  ? AT1G61240 Secondary Identifier:  ? PAC:19657990
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G61240 0.5kb upstream 0.5kb upstream 4247 true Chr1: 22580966-22585212 Arabidopsis thaliana
AT1G61240 0.5kb upstream 0.5kb upstream 500 false Chr1: 22580966-22581465 Arabidopsis thaliana
AT1G61240 0.5kb downstream 0.5kb downstream 4247 true Chr1: 22581466-22585712 Arabidopsis thaliana
AT1G61240 0.5kb downstream 0.5kb downstream 500 false Chr1: 22585213-22585712 Arabidopsis thaliana
AT1G61240 1.0kb upstream 1.0kb upstream 4747 true Chr1: 22580466-22585212 Arabidopsis thaliana
AT1G61240 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22580466-22581465 Arabidopsis thaliana
AT1G61240 1.0kb downstream 1.0kb downstream 4747 true Chr1: 22581466-22586212 Arabidopsis thaliana
AT1G61240 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22585213-22586212 Arabidopsis thaliana
AT1G61240 2.0kb upstream 2.0kb upstream 5747 true Chr1: 22579466-22585212 Arabidopsis thaliana
AT1G61240 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22579466-22581465 Arabidopsis thaliana
AT1G61240 2.0kb downstream 2.0kb downstream 5747 true Chr1: 22581466-22587212 Arabidopsis thaliana
AT1G61240 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22585213-22587212 Arabidopsis thaliana
AT1G61240 5.0kb upstream 5.0kb upstream 8747 true Chr1: 22576466-22585212 Arabidopsis thaliana
AT1G61240 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22576466-22581465 Arabidopsis thaliana
AT1G61240 5.0kb downstream 5.0kb downstream 8747 true Chr1: 22581466-22590212 Arabidopsis thaliana
AT1G61240 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22585213-22590212 Arabidopsis thaliana
AT1G61240 10.0kb upstream 10.0kb upstream 13747 true Chr1: 22571466-22585212 Arabidopsis thaliana
AT1G61240 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22571466-22581465 Arabidopsis thaliana
AT1G61240 10.0kb downstream 10.0kb downstream 13747 true Chr1: 22581466-22595212 Arabidopsis thaliana
AT1G61240 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22585213-22595212 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374402 5261 Brassicaceae View MSA
123835260 5264 Brassicales-Malvales View MSA
124346542 5266 SBM View MSA
124242169 5268 Malvidae View MSA
124050712 5270 Rosid View MSA
123737246 5271 Pentapetalae View MSA
122789786 5272 Eudicot View MSA
122044506 5273 Angiosperm View MSA
121349221 5274 Embryophyte View MSA
123381221 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.319       Low
cufflinks 2.075        
cufflinks 2.127        
cufflinks 2.042        
cufflinks 1.862        
cufflinks 2.145        

0 Strain