Gene : AT1G60990 A. thaliana TAIR10
Defline:  (1 of 2) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Genomic Order:  4993
Name:  ? AT1G60990 Secondary Identifier:  ? PAC:19655983
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1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana GLYCLEAV-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G60990 0.5kb upstream 0.5kb upstream 3899 true Chr1: 22462026-22465924 Arabidopsis thaliana
AT1G60990 0.5kb upstream 0.5kb upstream 500 false Chr1: 22465425-22465924 Arabidopsis thaliana
AT1G60990 0.5kb downstream 0.5kb downstream 3899 true Chr1: 22461526-22465424 Arabidopsis thaliana
AT1G60990 0.5kb downstream 0.5kb downstream 500 false Chr1: 22461526-22462025 Arabidopsis thaliana
AT1G60990 1.0kb upstream 1.0kb upstream 4399 true Chr1: 22462026-22466424 Arabidopsis thaliana
AT1G60990 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22465425-22466424 Arabidopsis thaliana
AT1G60990 1.0kb downstream 1.0kb downstream 4399 true Chr1: 22461026-22465424 Arabidopsis thaliana
AT1G60990 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22461026-22462025 Arabidopsis thaliana
AT1G60990 2.0kb upstream 2.0kb upstream 5399 true Chr1: 22462026-22467424 Arabidopsis thaliana
AT1G60990 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22465425-22467424 Arabidopsis thaliana
AT1G60990 2.0kb downstream 2.0kb downstream 5399 true Chr1: 22460026-22465424 Arabidopsis thaliana
AT1G60990 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22460026-22462025 Arabidopsis thaliana
AT1G60990 5.0kb upstream 5.0kb upstream 8399 true Chr1: 22462026-22470424 Arabidopsis thaliana
AT1G60990 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22465425-22470424 Arabidopsis thaliana
AT1G60990 5.0kb downstream 5.0kb downstream 8399 true Chr1: 22457026-22465424 Arabidopsis thaliana
AT1G60990 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22457026-22462025 Arabidopsis thaliana
AT1G60990 10.0kb upstream 10.0kb upstream 13399 true Chr1: 22462026-22475424 Arabidopsis thaliana
AT1G60990 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22465425-22475424 Arabidopsis thaliana
AT1G60990 10.0kb downstream 10.0kb downstream 13399 true Chr1: 22452026-22465424 Arabidopsis thaliana
AT1G60990 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22452026-22462025 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367907 5261 Brassicaceae View MSA
123829010 5264 Brassicales-Malvales View MSA
124339794 5266 SBM View MSA
124244031 5268 Malvidae View MSA
124066911 5270 Rosid View MSA
123736787 5271 Pentapetalae View MSA
122786852 5272 Eudicot View MSA
122044348 5273 Angiosperm View MSA
121345133 5274 Embryophyte View MSA
123423881 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.103        
cufflinks 1.447        
cufflinks 3.399       High
cufflinks 1.536        
cufflinks 2.841        
cufflinks 1.247       Low

0 Strain