Gene : AT1G60890 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23086//PTHR23086:SF25 - PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE // PHOSPHATIDYLINOSITOL 4-PHOSPHATE 5-KINASE 7-RELATED Genomic Order:  4979
Name:  ? AT1G60890 Secondary Identifier:  ? PAC:19653936
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6351 Arabidopsis thaliana pathologic  
Athaliana PWY-6352 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G60890 0.5kb upstream 0.5kb upstream 5499 true Chr1: 22412246-22417744 Arabidopsis thaliana
AT1G60890 0.5kb upstream 0.5kb upstream 500 false Chr1: 22417245-22417744 Arabidopsis thaliana
AT1G60890 0.5kb downstream 0.5kb downstream 5499 true Chr1: 22411746-22417244 Arabidopsis thaliana
AT1G60890 0.5kb downstream 0.5kb downstream 500 false Chr1: 22411746-22412245 Arabidopsis thaliana
AT1G60890 1.0kb upstream 1.0kb upstream 5999 true Chr1: 22412246-22418244 Arabidopsis thaliana
AT1G60890 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22417245-22418244 Arabidopsis thaliana
AT1G60890 1.0kb downstream 1.0kb downstream 5999 true Chr1: 22411246-22417244 Arabidopsis thaliana
AT1G60890 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22411246-22412245 Arabidopsis thaliana
AT1G60890 2.0kb upstream 2.0kb upstream 6999 true Chr1: 22412246-22419244 Arabidopsis thaliana
AT1G60890 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22417245-22419244 Arabidopsis thaliana
AT1G60890 2.0kb downstream 2.0kb downstream 6999 true Chr1: 22410246-22417244 Arabidopsis thaliana
AT1G60890 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22410246-22412245 Arabidopsis thaliana
AT1G60890 5.0kb upstream 5.0kb upstream 9999 true Chr1: 22412246-22422244 Arabidopsis thaliana
AT1G60890 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22417245-22422244 Arabidopsis thaliana
AT1G60890 5.0kb downstream 5.0kb downstream 9999 true Chr1: 22407246-22417244 Arabidopsis thaliana
AT1G60890 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22407246-22412245 Arabidopsis thaliana
AT1G60890 10.0kb upstream 10.0kb upstream 14999 true Chr1: 22412246-22427244 Arabidopsis thaliana
AT1G60890 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22417245-22427244 Arabidopsis thaliana
AT1G60890 10.0kb downstream 10.0kb downstream 14999 true Chr1: 22402246-22417244 Arabidopsis thaliana
AT1G60890 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22402246-22412245 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363936 5261 Brassicaceae View MSA
123837700 5264 Brassicales-Malvales View MSA
124340439 5266 SBM View MSA
124241221 5268 Malvidae View MSA
124065349 5270 Rosid View MSA
123742809 5271 Pentapetalae View MSA
122786651 5272 Eudicot View MSA
122046266 5273 Angiosperm View MSA
121310580 5274 Embryophyte View MSA
123428791 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.637        
cufflinks 4.66        
cufflinks 2.148        
cufflinks 3.986        
cufflinks 1.719       Low
cufflinks 6.062       High

0 Strain