Gene : MEE9 A. thaliana TAIR10
Primary Identifier:  ? AT1G60870 Defline:  maternal effect embryo arrest 9
Genomic Order:  4977 Name:  ? AT1G60870
Secondary Identifier:  ? PAC:19651393
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G60870 0.5kb upstream 0.5kb upstream 1683 true Chr1: 22408972-22410654 Arabidopsis thaliana
AT1G60870 0.5kb upstream 0.5kb upstream 500 false Chr1: 22408972-22409471 Arabidopsis thaliana
AT1G60870 0.5kb downstream 0.5kb downstream 1683 true Chr1: 22409472-22411154 Arabidopsis thaliana
AT1G60870 0.5kb downstream 0.5kb downstream 500 false Chr1: 22410655-22411154 Arabidopsis thaliana
AT1G60870 1.0kb upstream 1.0kb upstream 2183 true Chr1: 22408472-22410654 Arabidopsis thaliana
AT1G60870 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22408472-22409471 Arabidopsis thaliana
AT1G60870 1.0kb downstream 1.0kb downstream 2183 true Chr1: 22409472-22411654 Arabidopsis thaliana
AT1G60870 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22410655-22411654 Arabidopsis thaliana
AT1G60870 2.0kb upstream 2.0kb upstream 3183 true Chr1: 22407472-22410654 Arabidopsis thaliana
AT1G60870 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22407472-22409471 Arabidopsis thaliana
AT1G60870 2.0kb downstream 2.0kb downstream 3183 true Chr1: 22409472-22412654 Arabidopsis thaliana
AT1G60870 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22410655-22412654 Arabidopsis thaliana
AT1G60870 5.0kb upstream 5.0kb upstream 6183 true Chr1: 22404472-22410654 Arabidopsis thaliana
AT1G60870 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22404472-22409471 Arabidopsis thaliana
AT1G60870 5.0kb downstream 5.0kb downstream 6183 true Chr1: 22409472-22415654 Arabidopsis thaliana
AT1G60870 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22410655-22415654 Arabidopsis thaliana
AT1G60870 10.0kb upstream 10.0kb upstream 11183 true Chr1: 22399472-22410654 Arabidopsis thaliana
AT1G60870 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22399472-22409471 Arabidopsis thaliana
AT1G60870 10.0kb downstream 10.0kb downstream 11183 true Chr1: 22409472-22420654 Arabidopsis thaliana
AT1G60870 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22410655-22420654 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369416 5261 Brassicaceae View MSA
123831167 5264 Brassicales-Malvales View MSA
124337028 5266 SBM View MSA
124241420 5268 Malvidae View MSA
124066121 5270 Rosid View MSA
123737729 5271 Pentapetalae View MSA
122791218 5272 Eudicot View MSA
122045039 5273 Angiosperm View MSA
121310391 5274 Embryophyte View MSA
123347887 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.029     High High
cufflinks 33.141     High  
cufflinks 44.454     High  
cufflinks 26.655       Low
cufflinks 43.51     High  
cufflinks 30.231     High  

0 Strain