Gene : AT1G60610 A. thaliana TAIR10
Defline:  (1 of 2) PTHR10044:SF108 - S-RIBONUCLEASE BINDING PROTEIN SBP1-RELATED Genomic Order:  4950
Name:  ? AT1G60610 Secondary Identifier:  ? PAC:19652579
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G60610 0.5kb upstream 0.5kb upstream 2865 true Chr1: 22327912-22330776 Arabidopsis thaliana
AT1G60610 0.5kb upstream 0.5kb upstream 500 false Chr1: 22330277-22330776 Arabidopsis thaliana
AT1G60610 0.5kb downstream 0.5kb downstream 2865 true Chr1: 22327412-22330276 Arabidopsis thaliana
AT1G60610 0.5kb downstream 0.5kb downstream 500 false Chr1: 22327412-22327911 Arabidopsis thaliana
AT1G60610 1.0kb upstream 1.0kb upstream 3365 true Chr1: 22327912-22331276 Arabidopsis thaliana
AT1G60610 1.0kb upstream 1.0kb upstream 1000 false Chr1: 22330277-22331276 Arabidopsis thaliana
AT1G60610 1.0kb downstream 1.0kb downstream 3365 true Chr1: 22326912-22330276 Arabidopsis thaliana
AT1G60610 1.0kb downstream 1.0kb downstream 1000 false Chr1: 22326912-22327911 Arabidopsis thaliana
AT1G60610 2.0kb upstream 2.0kb upstream 4365 true Chr1: 22327912-22332276 Arabidopsis thaliana
AT1G60610 2.0kb upstream 2.0kb upstream 2000 false Chr1: 22330277-22332276 Arabidopsis thaliana
AT1G60610 2.0kb downstream 2.0kb downstream 4365 true Chr1: 22325912-22330276 Arabidopsis thaliana
AT1G60610 2.0kb downstream 2.0kb downstream 2000 false Chr1: 22325912-22327911 Arabidopsis thaliana
AT1G60610 5.0kb upstream 5.0kb upstream 7365 true Chr1: 22327912-22335276 Arabidopsis thaliana
AT1G60610 5.0kb upstream 5.0kb upstream 5000 false Chr1: 22330277-22335276 Arabidopsis thaliana
AT1G60610 5.0kb downstream 5.0kb downstream 7365 true Chr1: 22322912-22330276 Arabidopsis thaliana
AT1G60610 5.0kb downstream 5.0kb downstream 5000 false Chr1: 22322912-22327911 Arabidopsis thaliana
AT1G60610 10.0kb upstream 10.0kb upstream 12365 true Chr1: 22327912-22340276 Arabidopsis thaliana
AT1G60610 10.0kb upstream 10.0kb upstream 10000 false Chr1: 22330277-22340276 Arabidopsis thaliana
AT1G60610 10.0kb downstream 10.0kb downstream 12365 true Chr1: 22317912-22330276 Arabidopsis thaliana
AT1G60610 10.0kb downstream 10.0kb downstream 10000 false Chr1: 22317912-22327911 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375249 5261 Brassicaceae View MSA
123800912 5264 Brassicales-Malvales View MSA
124298271 5266 SBM View MSA
124149953 5268 Malvidae View MSA
123875661 5270 Rosid View MSA
123459447 5271 Pentapetalae View MSA
122494838 5272 Eudicot View MSA
122050089 5273 Angiosperm View MSA
121348016 5274 Embryophyte View MSA
123380706 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.26        
cufflinks 5.492        
cufflinks 0.871       Low
cufflinks 6.945       High
cufflinks 1.54        
cufflinks 4.549        

0 Strain