Gene : SNL4 A. thaliana TAIR10
Primary Identifier:  ? AT1G70060 Defline:  (1 of 6) K11644 - paired amphipathic helix protein Sin3a (SIN3A)
Genomic Order:  5964 Name:  ? AT1G70060
Secondary Identifier:  ? PAC:19652144
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G70060 0.5kb upstream 0.5kb upstream 7173 true Chr1: 26382744-26389916 Arabidopsis thaliana
AT1G70060 0.5kb upstream 0.5kb upstream 500 false Chr1: 26382744-26383243 Arabidopsis thaliana
AT1G70060 0.5kb downstream 0.5kb downstream 7173 true Chr1: 26383244-26390416 Arabidopsis thaliana
AT1G70060 0.5kb downstream 0.5kb downstream 500 false Chr1: 26389917-26390416 Arabidopsis thaliana
AT1G70060 1.0kb upstream 1.0kb upstream 7673 true Chr1: 26382244-26389916 Arabidopsis thaliana
AT1G70060 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26382244-26383243 Arabidopsis thaliana
AT1G70060 1.0kb downstream 1.0kb downstream 7673 true Chr1: 26383244-26390916 Arabidopsis thaliana
AT1G70060 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26389917-26390916 Arabidopsis thaliana
AT1G70060 2.0kb upstream 2.0kb upstream 8673 true Chr1: 26381244-26389916 Arabidopsis thaliana
AT1G70060 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26381244-26383243 Arabidopsis thaliana
AT1G70060 2.0kb downstream 2.0kb downstream 8673 true Chr1: 26383244-26391916 Arabidopsis thaliana
AT1G70060 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26389917-26391916 Arabidopsis thaliana
AT1G70060 5.0kb upstream 5.0kb upstream 11673 true Chr1: 26378244-26389916 Arabidopsis thaliana
AT1G70060 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26378244-26383243 Arabidopsis thaliana
AT1G70060 5.0kb downstream 5.0kb downstream 11673 true Chr1: 26383244-26394916 Arabidopsis thaliana
AT1G70060 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26389917-26394916 Arabidopsis thaliana
AT1G70060 10.0kb upstream 10.0kb upstream 16673 true Chr1: 26373244-26389916 Arabidopsis thaliana
AT1G70060 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26373244-26383243 Arabidopsis thaliana
AT1G70060 10.0kb downstream 10.0kb downstream 16673 true Chr1: 26383244-26399916 Arabidopsis thaliana
AT1G70060 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26389917-26399916 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376043 5261 Brassicaceae View MSA
123838025 5264 Brassicales-Malvales View MSA
124338012 5266 SBM View MSA
124241191 5268 Malvidae View MSA
124067617 5270 Rosid View MSA
123752813 5271 Pentapetalae View MSA
122791038 5272 Eudicot View MSA
122047034 5273 Angiosperm View MSA
121346152 5274 Embryophyte View MSA
123428507 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.961        
cufflinks 12.213        
cufflinks 7.673       Low
cufflinks 12.862        
cufflinks 8.262       Low
cufflinks 12.927        

0 Strain