Gene : AGL94 A. thaliana TAIR10
Primary Identifier:  ? AT1G69540 Defline:  (1 of 2) PTHR11945:SF169 - MADS-BOX FAMILY PROTEIN
Genomic Order:  5911 Name:  ? AT1G69540
Secondary Identifier:  ? PAC:19658298
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G69540 0.5kb upstream 0.5kb upstream 3028 true Chr1: 26145044-26148071 Arabidopsis thaliana
AT1G69540 0.5kb upstream 0.5kb upstream 500 false Chr1: 26147572-26148071 Arabidopsis thaliana
AT1G69540 0.5kb downstream 0.5kb downstream 3028 true Chr1: 26144544-26147571 Arabidopsis thaliana
AT1G69540 0.5kb downstream 0.5kb downstream 500 false Chr1: 26144544-26145043 Arabidopsis thaliana
AT1G69540 1.0kb upstream 1.0kb upstream 3528 true Chr1: 26145044-26148571 Arabidopsis thaliana
AT1G69540 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26147572-26148571 Arabidopsis thaliana
AT1G69540 1.0kb downstream 1.0kb downstream 3528 true Chr1: 26144044-26147571 Arabidopsis thaliana
AT1G69540 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26144044-26145043 Arabidopsis thaliana
AT1G69540 2.0kb upstream 2.0kb upstream 4528 true Chr1: 26145044-26149571 Arabidopsis thaliana
AT1G69540 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26147572-26149571 Arabidopsis thaliana
AT1G69540 2.0kb downstream 2.0kb downstream 4528 true Chr1: 26143044-26147571 Arabidopsis thaliana
AT1G69540 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26143044-26145043 Arabidopsis thaliana
AT1G69540 5.0kb upstream 5.0kb upstream 7528 true Chr1: 26145044-26152571 Arabidopsis thaliana
AT1G69540 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26147572-26152571 Arabidopsis thaliana
AT1G69540 5.0kb downstream 5.0kb downstream 7528 true Chr1: 26140044-26147571 Arabidopsis thaliana
AT1G69540 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26140044-26145043 Arabidopsis thaliana
AT1G69540 10.0kb upstream 10.0kb upstream 12528 true Chr1: 26145044-26157571 Arabidopsis thaliana
AT1G69540 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26147572-26157571 Arabidopsis thaliana
AT1G69540 10.0kb downstream 10.0kb downstream 12528 true Chr1: 26135044-26147571 Arabidopsis thaliana
AT1G69540 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26135044-26145043 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511047 5273 Angiosperm View MSA
122371566 5261 Brassicaceae View MSA
123800188 5264 Brassicales-Malvales View MSA
124297632 5266 SBM View MSA
124149468 5268 Malvidae View MSA
123875273 5270 Rosid View MSA
123459125 5271 Pentapetalae View MSA
122494520 5272 Eudicot View MSA
120784115 5274 Embryophyte View MSA
122826051 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.28     Low  
cufflinks 0.541        
cufflinks 0.479        
cufflinks 0.277     Low  
cufflinks 0.417        
cufflinks 0.118     Low Low

0 Strain