Gene : AFP1 A. thaliana TAIR10
Primary Identifier:  ? AT1G69260 Defline:  (1 of 3) PTHR31413//PTHR31413:SF4 - FAMILY NOT NAMED // NINJA-FAMILY PROTEIN AFP1-RELATED
Genomic Order:  5879 Name:  ? AT1G69260
Secondary Identifier:  ? PAC:19654707
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0 Pathways

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G69260 0.5kb upstream 0.5kb upstream 2173 true Chr1: 26038548-26040720 Arabidopsis thaliana
AT1G69260 0.5kb upstream 0.5kb upstream 500 false Chr1: 26038548-26039047 Arabidopsis thaliana
AT1G69260 0.5kb downstream 0.5kb downstream 2173 true Chr1: 26039048-26041220 Arabidopsis thaliana
AT1G69260 0.5kb downstream 0.5kb downstream 500 false Chr1: 26040721-26041220 Arabidopsis thaliana
AT1G69260 1.0kb upstream 1.0kb upstream 2673 true Chr1: 26038048-26040720 Arabidopsis thaliana
AT1G69260 1.0kb upstream 1.0kb upstream 1000 false Chr1: 26038048-26039047 Arabidopsis thaliana
AT1G69260 1.0kb downstream 1.0kb downstream 2673 true Chr1: 26039048-26041720 Arabidopsis thaliana
AT1G69260 1.0kb downstream 1.0kb downstream 1000 false Chr1: 26040721-26041720 Arabidopsis thaliana
AT1G69260 2.0kb upstream 2.0kb upstream 3673 true Chr1: 26037048-26040720 Arabidopsis thaliana
AT1G69260 2.0kb upstream 2.0kb upstream 2000 false Chr1: 26037048-26039047 Arabidopsis thaliana
AT1G69260 2.0kb downstream 2.0kb downstream 3673 true Chr1: 26039048-26042720 Arabidopsis thaliana
AT1G69260 2.0kb downstream 2.0kb downstream 2000 false Chr1: 26040721-26042720 Arabidopsis thaliana
AT1G69260 5.0kb upstream 5.0kb upstream 6673 true Chr1: 26034048-26040720 Arabidopsis thaliana
AT1G69260 5.0kb upstream 5.0kb upstream 5000 false Chr1: 26034048-26039047 Arabidopsis thaliana
AT1G69260 5.0kb downstream 5.0kb downstream 6673 true Chr1: 26039048-26045720 Arabidopsis thaliana
AT1G69260 5.0kb downstream 5.0kb downstream 5000 false Chr1: 26040721-26045720 Arabidopsis thaliana
AT1G69260 10.0kb upstream 10.0kb upstream 11673 true Chr1: 26029048-26040720 Arabidopsis thaliana
AT1G69260 10.0kb upstream 10.0kb upstream 10000 false Chr1: 26029048-26039047 Arabidopsis thaliana
AT1G69260 10.0kb downstream 10.0kb downstream 11673 true Chr1: 26039048-26050720 Arabidopsis thaliana
AT1G69260 10.0kb downstream 10.0kb downstream 10000 false Chr1: 26040721-26050720 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373623 5261 Brassicaceae View MSA
123841111 5264 Brassicales-Malvales View MSA
124349458 5266 SBM View MSA
124251961 5268 Malvidae View MSA
124071046 5270 Rosid View MSA
123753389 5271 Pentapetalae View MSA
122792096 5272 Eudicot View MSA
122050177 5273 Angiosperm View MSA
121311781 5274 Embryophyte View MSA
123349031 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.686        
cufflinks 4.484        
cufflinks 0.808       Low
cufflinks 10.897       High
cufflinks 2.541        
cufflinks 9.775        

0 Strain