Gene : AT1G67780 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31169//PTHR31169:SF1 - FAMILY NOT NAMED // ZINC-FINGER DOMAIN OF MONOAMINE-OXIDASE A REPRESSOR R1 PROTEIN Genomic Order:  5719
Name:  ? AT1G67780 Secondary Identifier:  ? PAC:19650693
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G67780 0.5kb upstream 0.5kb upstream 3215 true Chr1: 25412316-25415530 Arabidopsis thaliana
AT1G67780 0.5kb upstream 0.5kb upstream 500 false Chr1: 25412316-25412815 Arabidopsis thaliana
AT1G67780 0.5kb downstream 0.5kb downstream 3215 true Chr1: 25412816-25416030 Arabidopsis thaliana
AT1G67780 0.5kb downstream 0.5kb downstream 500 false Chr1: 25415531-25416030 Arabidopsis thaliana
AT1G67780 1.0kb upstream 1.0kb upstream 3715 true Chr1: 25411816-25415530 Arabidopsis thaliana
AT1G67780 1.0kb upstream 1.0kb upstream 1000 false Chr1: 25411816-25412815 Arabidopsis thaliana
AT1G67780 1.0kb downstream 1.0kb downstream 3715 true Chr1: 25412816-25416530 Arabidopsis thaliana
AT1G67780 1.0kb downstream 1.0kb downstream 1000 false Chr1: 25415531-25416530 Arabidopsis thaliana
AT1G67780 2.0kb upstream 2.0kb upstream 4715 true Chr1: 25410816-25415530 Arabidopsis thaliana
AT1G67780 2.0kb upstream 2.0kb upstream 2000 false Chr1: 25410816-25412815 Arabidopsis thaliana
AT1G67780 2.0kb downstream 2.0kb downstream 4715 true Chr1: 25412816-25417530 Arabidopsis thaliana
AT1G67780 2.0kb downstream 2.0kb downstream 2000 false Chr1: 25415531-25417530 Arabidopsis thaliana
AT1G67780 5.0kb upstream 5.0kb upstream 7715 true Chr1: 25407816-25415530 Arabidopsis thaliana
AT1G67780 5.0kb upstream 5.0kb upstream 5000 false Chr1: 25407816-25412815 Arabidopsis thaliana
AT1G67780 5.0kb downstream 5.0kb downstream 7715 true Chr1: 25412816-25420530 Arabidopsis thaliana
AT1G67780 5.0kb downstream 5.0kb downstream 5000 false Chr1: 25415531-25420530 Arabidopsis thaliana
AT1G67780 10.0kb upstream 10.0kb upstream 12715 true Chr1: 25402816-25415530 Arabidopsis thaliana
AT1G67780 10.0kb upstream 10.0kb upstream 10000 false Chr1: 25402816-25412815 Arabidopsis thaliana
AT1G67780 10.0kb downstream 10.0kb downstream 12715 true Chr1: 25412816-25425530 Arabidopsis thaliana
AT1G67780 10.0kb downstream 10.0kb downstream 10000 false Chr1: 25415531-25425530 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372298 5261 Brassicaceae View MSA
123840930 5264 Brassicales-Malvales View MSA
124349921 5266 SBM View MSA
124237172 5268 Malvidae View MSA
124072248 5270 Rosid View MSA
123741125 5271 Pentapetalae View MSA
122796203 5272 Eudicot View MSA
122042445 5273 Angiosperm View MSA
121349857 5274 Embryophyte View MSA
123427562 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.4        
cufflinks 1.637        
cufflinks 0.222     Low  
cufflinks 1.779        
cufflinks 0.157     Low Low
cufflinks 2.417       High

0 Strain