Gene : ASY1 A. thaliana TAIR10
Primary Identifier:  ? AT1G67370 Defline:  (1 of 2) KOG4652 - HORMA domain
Genomic Order:  5676 Name:  ? AT1G67370
Secondary Identifier:  ? PAC:19649653
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G67370 0.5kb upstream 0.5kb upstream 5221 true Chr1: 25239117-25244337 Arabidopsis thaliana
AT1G67370 0.5kb upstream 0.5kb upstream 500 false Chr1: 25243838-25244337 Arabidopsis thaliana
AT1G67370 0.5kb downstream 0.5kb downstream 5221 true Chr1: 25238617-25243837 Arabidopsis thaliana
AT1G67370 0.5kb downstream 0.5kb downstream 500 false Chr1: 25238617-25239116 Arabidopsis thaliana
AT1G67370 1.0kb upstream 1.0kb upstream 5721 true Chr1: 25239117-25244837 Arabidopsis thaliana
AT1G67370 1.0kb upstream 1.0kb upstream 1000 false Chr1: 25243838-25244837 Arabidopsis thaliana
AT1G67370 1.0kb downstream 1.0kb downstream 5721 true Chr1: 25238117-25243837 Arabidopsis thaliana
AT1G67370 1.0kb downstream 1.0kb downstream 1000 false Chr1: 25238117-25239116 Arabidopsis thaliana
AT1G67370 2.0kb upstream 2.0kb upstream 6721 true Chr1: 25239117-25245837 Arabidopsis thaliana
AT1G67370 2.0kb upstream 2.0kb upstream 2000 false Chr1: 25243838-25245837 Arabidopsis thaliana
AT1G67370 2.0kb downstream 2.0kb downstream 6721 true Chr1: 25237117-25243837 Arabidopsis thaliana
AT1G67370 2.0kb downstream 2.0kb downstream 2000 false Chr1: 25237117-25239116 Arabidopsis thaliana
AT1G67370 5.0kb upstream 5.0kb upstream 9721 true Chr1: 25239117-25248837 Arabidopsis thaliana
AT1G67370 5.0kb upstream 5.0kb upstream 5000 false Chr1: 25243838-25248837 Arabidopsis thaliana
AT1G67370 5.0kb downstream 5.0kb downstream 9721 true Chr1: 25234117-25243837 Arabidopsis thaliana
AT1G67370 5.0kb downstream 5.0kb downstream 5000 false Chr1: 25234117-25239116 Arabidopsis thaliana
AT1G67370 10.0kb upstream 10.0kb upstream 14721 true Chr1: 25239117-25253837 Arabidopsis thaliana
AT1G67370 10.0kb upstream 10.0kb upstream 10000 false Chr1: 25243838-25253837 Arabidopsis thaliana
AT1G67370 10.0kb downstream 10.0kb downstream 14721 true Chr1: 25229117-25243837 Arabidopsis thaliana
AT1G67370 10.0kb downstream 10.0kb downstream 10000 false Chr1: 25229117-25239116 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041471 5273 Angiosperm View MSA
122362399 5261 Brassicaceae View MSA
123830826 5264 Brassicales-Malvales View MSA
124338854 5266 SBM View MSA
124242492 5268 Malvidae View MSA
124067688 5270 Rosid View MSA
123740838 5271 Pentapetalae View MSA
122791726 5272 Eudicot View MSA
123429135 5275 Viridiplantae View MSA
121347816 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.299        
cufflinks 1.515        
cufflinks 0.265     Low  
cufflinks 1.113        
cufflinks 0.253        
cufflinks 1.713       High

0 Strain