Gene : RBCS1A A. thaliana TAIR10
Primary Identifier:  ? AT1G67090 Defline:  (1 of 4) K01602 - ribulose-bisphosphate carboxylase small chain (rbcS)
Genomic Order:  5647 Name:  ? AT1G67090
Secondary Identifier:  ? PAC:19654990
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Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana CALVIN-PWY Arabidopsis thaliana pathologic  
Athaliana PHOTOALL-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-5723 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G67090 0.5kb upstream 0.5kb upstream 1767 true Chr1: 25048158-25049924 Arabidopsis thaliana
AT1G67090 0.5kb upstream 0.5kb upstream 500 false Chr1: 25049425-25049924 Arabidopsis thaliana
AT1G67090 0.5kb downstream 0.5kb downstream 1767 true Chr1: 25047658-25049424 Arabidopsis thaliana
AT1G67090 0.5kb downstream 0.5kb downstream 500 false Chr1: 25047658-25048157 Arabidopsis thaliana
AT1G67090 1.0kb upstream 1.0kb upstream 2267 true Chr1: 25048158-25050424 Arabidopsis thaliana
AT1G67090 1.0kb upstream 1.0kb upstream 1000 false Chr1: 25049425-25050424 Arabidopsis thaliana
AT1G67090 1.0kb downstream 1.0kb downstream 2267 true Chr1: 25047158-25049424 Arabidopsis thaliana
AT1G67090 1.0kb downstream 1.0kb downstream 1000 false Chr1: 25047158-25048157 Arabidopsis thaliana
AT1G67090 2.0kb upstream 2.0kb upstream 3267 true Chr1: 25048158-25051424 Arabidopsis thaliana
AT1G67090 2.0kb upstream 2.0kb upstream 2000 false Chr1: 25049425-25051424 Arabidopsis thaliana
AT1G67090 2.0kb downstream 2.0kb downstream 3267 true Chr1: 25046158-25049424 Arabidopsis thaliana
AT1G67090 2.0kb downstream 2.0kb downstream 2000 false Chr1: 25046158-25048157 Arabidopsis thaliana
AT1G67090 5.0kb upstream 5.0kb upstream 6267 true Chr1: 25048158-25054424 Arabidopsis thaliana
AT1G67090 5.0kb upstream 5.0kb upstream 5000 false Chr1: 25049425-25054424 Arabidopsis thaliana
AT1G67090 5.0kb downstream 5.0kb downstream 6267 true Chr1: 25043158-25049424 Arabidopsis thaliana
AT1G67090 5.0kb downstream 5.0kb downstream 5000 false Chr1: 25043158-25048157 Arabidopsis thaliana
AT1G67090 10.0kb upstream 10.0kb upstream 11267 true Chr1: 25048158-25059424 Arabidopsis thaliana
AT1G67090 10.0kb upstream 10.0kb upstream 10000 false Chr1: 25049425-25059424 Arabidopsis thaliana
AT1G67090 10.0kb downstream 10.0kb downstream 11267 true Chr1: 25038158-25049424 Arabidopsis thaliana
AT1G67090 10.0kb downstream 10.0kb downstream 10000 false Chr1: 25038158-25048157 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380509 5261 Brassicaceae View MSA
123836682 5264 Brassicales-Malvales View MSA
124340616 5266 SBM View MSA
124250367 5268 Malvidae View MSA
124066802 5270 Rosid View MSA
123747186 5271 Pentapetalae View MSA
122796864 5272 Eudicot View MSA
122046951 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3683.672     High  
cufflinks 8.1        
cufflinks 5342.193     High  
cufflinks 10.644        
cufflinks 4517.192     High  
cufflinks 4.169       Low

0 Strain