Gene : AT1G66940 A. thaliana TAIR10
Defline:  (1 of 11) PF14380 - Wall-associated receptor kinase C-terminal (WAK_assoc) Genomic Order:  5632
Name:  ? AT1G66940 Secondary Identifier:  ? PAC:19656941
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G66940 0.5kb upstream 0.5kb upstream 2264 true Chr1: 24973028-24975291 Arabidopsis thaliana
AT1G66940 0.5kb upstream 0.5kb upstream 500 false Chr1: 24974792-24975291 Arabidopsis thaliana
AT1G66940 0.5kb downstream 0.5kb downstream 2264 true Chr1: 24972528-24974791 Arabidopsis thaliana
AT1G66940 0.5kb downstream 0.5kb downstream 500 false Chr1: 24972528-24973027 Arabidopsis thaliana
AT1G66940 1.0kb upstream 1.0kb upstream 2764 true Chr1: 24973028-24975791 Arabidopsis thaliana
AT1G66940 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24974792-24975791 Arabidopsis thaliana
AT1G66940 1.0kb downstream 1.0kb downstream 2764 true Chr1: 24972028-24974791 Arabidopsis thaliana
AT1G66940 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24972028-24973027 Arabidopsis thaliana
AT1G66940 2.0kb upstream 2.0kb upstream 3764 true Chr1: 24973028-24976791 Arabidopsis thaliana
AT1G66940 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24974792-24976791 Arabidopsis thaliana
AT1G66940 2.0kb downstream 2.0kb downstream 3764 true Chr1: 24971028-24974791 Arabidopsis thaliana
AT1G66940 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24971028-24973027 Arabidopsis thaliana
AT1G66940 5.0kb upstream 5.0kb upstream 6764 true Chr1: 24973028-24979791 Arabidopsis thaliana
AT1G66940 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24974792-24979791 Arabidopsis thaliana
AT1G66940 5.0kb downstream 5.0kb downstream 6764 true Chr1: 24968028-24974791 Arabidopsis thaliana
AT1G66940 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24968028-24973027 Arabidopsis thaliana
AT1G66940 10.0kb upstream 10.0kb upstream 11764 true Chr1: 24973028-24984791 Arabidopsis thaliana
AT1G66940 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24974792-24984791 Arabidopsis thaliana
AT1G66940 10.0kb downstream 10.0kb downstream 11764 true Chr1: 24963028-24974791 Arabidopsis thaliana
AT1G66940 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24963028-24973027 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343677 5261 Brassicaceae View MSA
123838663 5264 Brassicales-Malvales View MSA
124351042 5266 SBM View MSA
124253071 5268 Malvidae View MSA
124071115 5270 Rosid View MSA
123751617 5271 Pentapetalae View MSA
122796553 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.831        
cufflinks 0.462        
cufflinks 6.356        
cufflinks 0.176     Low Low
cufflinks 5.489        
cufflinks 0.42        

0 Strain