Gene : AT1G66810 A. thaliana TAIR10
Defline:  (1 of 2) PTHR12547//PTHR12547:SF60 - CCCH ZINC FINGER/TIS11-RELATED // ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 14-RELATED Genomic Order:  5617
Name:  ? AT1G66810 Secondary Identifier:  ? PAC:19651282
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G66810 0.5kb upstream 0.5kb upstream 1691 true Chr1: 24927613-24929303 Arabidopsis thaliana
AT1G66810 0.5kb upstream 0.5kb upstream 500 false Chr1: 24928804-24929303 Arabidopsis thaliana
AT1G66810 0.5kb downstream 0.5kb downstream 1691 true Chr1: 24927113-24928803 Arabidopsis thaliana
AT1G66810 0.5kb downstream 0.5kb downstream 500 false Chr1: 24927113-24927612 Arabidopsis thaliana
AT1G66810 1.0kb upstream 1.0kb upstream 2191 true Chr1: 24927613-24929803 Arabidopsis thaliana
AT1G66810 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24928804-24929803 Arabidopsis thaliana
AT1G66810 1.0kb downstream 1.0kb downstream 2191 true Chr1: 24926613-24928803 Arabidopsis thaliana
AT1G66810 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24926613-24927612 Arabidopsis thaliana
AT1G66810 2.0kb upstream 2.0kb upstream 3191 true Chr1: 24927613-24930803 Arabidopsis thaliana
AT1G66810 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24928804-24930803 Arabidopsis thaliana
AT1G66810 2.0kb downstream 2.0kb downstream 3191 true Chr1: 24925613-24928803 Arabidopsis thaliana
AT1G66810 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24925613-24927612 Arabidopsis thaliana
AT1G66810 5.0kb upstream 5.0kb upstream 6191 true Chr1: 24927613-24933803 Arabidopsis thaliana
AT1G66810 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24928804-24933803 Arabidopsis thaliana
AT1G66810 5.0kb downstream 5.0kb downstream 6191 true Chr1: 24922613-24928803 Arabidopsis thaliana
AT1G66810 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24922613-24927612 Arabidopsis thaliana
AT1G66810 10.0kb upstream 10.0kb upstream 11191 true Chr1: 24927613-24938803 Arabidopsis thaliana
AT1G66810 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24928804-24938803 Arabidopsis thaliana
AT1G66810 10.0kb downstream 10.0kb downstream 11191 true Chr1: 24917613-24928803 Arabidopsis thaliana
AT1G66810 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24917613-24927612 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371003 5261 Brassicaceae View MSA
123838341 5264 Brassicales-Malvales View MSA
124338797 5266 SBM View MSA
124237966 5268 Malvidae View MSA
124071931 5270 Rosid View MSA
123741558 5271 Pentapetalae View MSA
122789151 5272 Eudicot View MSA
122047448 5273 Angiosperm View MSA
121350535 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.77       Low
cufflinks 1.316        
cufflinks 1.041        
cufflinks 1.914        
cufflinks 0.938        
cufflinks 2.772       High

0 Strain