Gene : AT1G66840 A. thaliana TAIR10
Defline:  (1 of 2) PTHR32054//PTHR32054:SF5 - FAMILY NOT NAMED // PROTEIN PLASTID MOVEMENT IMPAIRED 15-RELATED Genomic Order:  5620
Name:  ? AT1G66840 Secondary Identifier:  ? PAC:19653049
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G66840 0.5kb upstream 0.5kb upstream 2967 true Chr1: 24933856-24936822 Arabidopsis thaliana
AT1G66840 0.5kb upstream 0.5kb upstream 500 false Chr1: 24936323-24936822 Arabidopsis thaliana
AT1G66840 0.5kb downstream 0.5kb downstream 2967 true Chr1: 24933356-24936322 Arabidopsis thaliana
AT1G66840 0.5kb downstream 0.5kb downstream 500 false Chr1: 24933356-24933855 Arabidopsis thaliana
AT1G66840 1.0kb upstream 1.0kb upstream 3467 true Chr1: 24933856-24937322 Arabidopsis thaliana
AT1G66840 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24936323-24937322 Arabidopsis thaliana
AT1G66840 1.0kb downstream 1.0kb downstream 3467 true Chr1: 24932856-24936322 Arabidopsis thaliana
AT1G66840 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24932856-24933855 Arabidopsis thaliana
AT1G66840 2.0kb upstream 2.0kb upstream 4467 true Chr1: 24933856-24938322 Arabidopsis thaliana
AT1G66840 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24936323-24938322 Arabidopsis thaliana
AT1G66840 2.0kb downstream 2.0kb downstream 4467 true Chr1: 24931856-24936322 Arabidopsis thaliana
AT1G66840 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24931856-24933855 Arabidopsis thaliana
AT1G66840 5.0kb upstream 5.0kb upstream 7467 true Chr1: 24933856-24941322 Arabidopsis thaliana
AT1G66840 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24936323-24941322 Arabidopsis thaliana
AT1G66840 5.0kb downstream 5.0kb downstream 7467 true Chr1: 24928856-24936322 Arabidopsis thaliana
AT1G66840 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24928856-24933855 Arabidopsis thaliana
AT1G66840 10.0kb upstream 10.0kb upstream 12467 true Chr1: 24933856-24946322 Arabidopsis thaliana
AT1G66840 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24936323-24946322 Arabidopsis thaliana
AT1G66840 10.0kb downstream 10.0kb downstream 12467 true Chr1: 24923856-24936322 Arabidopsis thaliana
AT1G66840 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24923856-24933855 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360847 5261 Brassicaceae View MSA
123836176 5264 Brassicales-Malvales View MSA
124341230 5266 SBM View MSA
124241989 5268 Malvidae View MSA
124068049 5270 Rosid View MSA
123748469 5271 Pentapetalae View MSA
122790777 5272 Eudicot View MSA
122041611 5273 Angiosperm View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.319       High
cufflinks 0.831        
cufflinks 7.012        
cufflinks 0.704        
cufflinks 3.923        
cufflinks 0.856        

0 Strain