Gene : GSR2 A. thaliana TAIR10
Primary Identifier:  ? AT1G66200 Defline:  (1 of 2) PTHR20852//PTHR20852:SF59 - GLUTAMINE SYNTHETASE // SUBFAMILY NOT NAMED
Genomic Order:  5552 Name:  ? AT1G66200
Secondary Identifier:  ? PAC:19652814
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana GLNSYN-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-3282 Arabidopsis thaliana pathologic  
Athaliana PWY-381 Arabidopsis thaliana pathologic  
Athaliana PWY-6549 Arabidopsis thaliana pathologic  
Athaliana PWY-6963 Arabidopsis thaliana pathologic  
Athaliana PWY-6964 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G66200 0.5kb upstream 0.5kb upstream 2974 true Chr1: 24655210-24658183 Arabidopsis thaliana
AT1G66200 0.5kb upstream 0.5kb upstream 500 false Chr1: 24657684-24658183 Arabidopsis thaliana
AT1G66200 0.5kb downstream 0.5kb downstream 2974 true Chr1: 24654710-24657683 Arabidopsis thaliana
AT1G66200 0.5kb downstream 0.5kb downstream 500 false Chr1: 24654710-24655209 Arabidopsis thaliana
AT1G66200 1.0kb upstream 1.0kb upstream 3474 true Chr1: 24655210-24658683 Arabidopsis thaliana
AT1G66200 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24657684-24658683 Arabidopsis thaliana
AT1G66200 1.0kb downstream 1.0kb downstream 3474 true Chr1: 24654210-24657683 Arabidopsis thaliana
AT1G66200 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24654210-24655209 Arabidopsis thaliana
AT1G66200 2.0kb upstream 2.0kb upstream 4474 true Chr1: 24655210-24659683 Arabidopsis thaliana
AT1G66200 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24657684-24659683 Arabidopsis thaliana
AT1G66200 2.0kb downstream 2.0kb downstream 4474 true Chr1: 24653210-24657683 Arabidopsis thaliana
AT1G66200 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24653210-24655209 Arabidopsis thaliana
AT1G66200 5.0kb upstream 5.0kb upstream 7474 true Chr1: 24655210-24662683 Arabidopsis thaliana
AT1G66200 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24657684-24662683 Arabidopsis thaliana
AT1G66200 5.0kb downstream 5.0kb downstream 7474 true Chr1: 24650210-24657683 Arabidopsis thaliana
AT1G66200 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24650210-24655209 Arabidopsis thaliana
AT1G66200 10.0kb upstream 10.0kb upstream 12474 true Chr1: 24655210-24667683 Arabidopsis thaliana
AT1G66200 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24657684-24667683 Arabidopsis thaliana
AT1G66200 10.0kb downstream 10.0kb downstream 12474 true Chr1: 24645210-24657683 Arabidopsis thaliana
AT1G66200 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24645210-24655209 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378986 5261 Brassicaceae View MSA
123841665 5264 Brassicales-Malvales View MSA
124350836 5266 SBM View MSA
124245417 5268 Malvidae View MSA
124072083 5270 Rosid View MSA
123746903 5271 Pentapetalae View MSA
122794697 5272 Eudicot View MSA
122048815 5273 Angiosperm View MSA
121347129 5274 Embryophyte View MSA
123428761 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.951     High  
cufflinks 32.014     High  
cufflinks 47.502     High  
cufflinks 49.632     High  
cufflinks 43.951     High  
cufflinks 10.708       Low

0 Strain