Gene : ATX1 A. thaliana TAIR10
Primary Identifier:  ? AT1G66240 Defline:  (1 of 2) K07213 - copper chaperone (ATOX1, ATX1, copZ)
Genomic Order:  5557 Name:  ? AT1G66240
Secondary Identifier:  ? PAC:19650055
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G66240 0.5kb upstream 0.5kb upstream 1577 true Chr1: 24686256-24687832 Arabidopsis thaliana
AT1G66240 0.5kb upstream 0.5kb upstream 500 false Chr1: 24687333-24687832 Arabidopsis thaliana
AT1G66240 0.5kb downstream 0.5kb downstream 1577 true Chr1: 24685756-24687332 Arabidopsis thaliana
AT1G66240 0.5kb downstream 0.5kb downstream 500 false Chr1: 24685756-24686255 Arabidopsis thaliana
AT1G66240 1.0kb upstream 1.0kb upstream 2077 true Chr1: 24686256-24688332 Arabidopsis thaliana
AT1G66240 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24687333-24688332 Arabidopsis thaliana
AT1G66240 1.0kb downstream 1.0kb downstream 2077 true Chr1: 24685256-24687332 Arabidopsis thaliana
AT1G66240 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24685256-24686255 Arabidopsis thaliana
AT1G66240 2.0kb upstream 2.0kb upstream 3077 true Chr1: 24686256-24689332 Arabidopsis thaliana
AT1G66240 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24687333-24689332 Arabidopsis thaliana
AT1G66240 2.0kb downstream 2.0kb downstream 3077 true Chr1: 24684256-24687332 Arabidopsis thaliana
AT1G66240 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24684256-24686255 Arabidopsis thaliana
AT1G66240 5.0kb upstream 5.0kb upstream 6077 true Chr1: 24686256-24692332 Arabidopsis thaliana
AT1G66240 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24687333-24692332 Arabidopsis thaliana
AT1G66240 5.0kb downstream 5.0kb downstream 6077 true Chr1: 24681256-24687332 Arabidopsis thaliana
AT1G66240 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24681256-24686255 Arabidopsis thaliana
AT1G66240 10.0kb upstream 10.0kb upstream 11077 true Chr1: 24686256-24697332 Arabidopsis thaliana
AT1G66240 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24687333-24697332 Arabidopsis thaliana
AT1G66240 10.0kb downstream 10.0kb downstream 11077 true Chr1: 24676256-24687332 Arabidopsis thaliana
AT1G66240 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24676256-24686255 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040990 5273 Angiosperm View MSA
122338657 5261 Brassicaceae View MSA
123779211 5264 Brassicales-Malvales View MSA
124277541 5266 SBM View MSA
124250881 5268 Malvidae View MSA
124065552 5270 Rosid View MSA
123743211 5271 Pentapetalae View MSA
122791151 5272 Eudicot View MSA
121351529 5274 Embryophyte View MSA
123424750 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 33.363     High  
cufflinks 48.589     High High
cufflinks 30.199     High Low
cufflinks 42.523     High  
cufflinks 30.665     High  
cufflinks 39.874     High  

0 Strain