Gene : AT1G65200 A. thaliana TAIR10
Defline:  (1 of 13) PTHR22975:SF9 - F6D8.33-RELATED Genomic Order:  5445
Name:  ? AT1G65200 Secondary Identifier:  ? PAC:19652858
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT1G65200 0.5kb upstream 0.5kb upstream 4820 true Chr1: 24218470-24223289 Arabidopsis thaliana
AT1G65200 0.5kb upstream 0.5kb upstream 500 false Chr1: 24222790-24223289 Arabidopsis thaliana
AT1G65200 0.5kb downstream 0.5kb downstream 4820 true Chr1: 24217970-24222789 Arabidopsis thaliana
AT1G65200 0.5kb downstream 0.5kb downstream 500 false Chr1: 24217970-24218469 Arabidopsis thaliana
AT1G65200 1.0kb upstream 1.0kb upstream 5320 true Chr1: 24218470-24223789 Arabidopsis thaliana
AT1G65200 1.0kb upstream 1.0kb upstream 1000 false Chr1: 24222790-24223789 Arabidopsis thaliana
AT1G65200 1.0kb downstream 1.0kb downstream 5320 true Chr1: 24217470-24222789 Arabidopsis thaliana
AT1G65200 1.0kb downstream 1.0kb downstream 1000 false Chr1: 24217470-24218469 Arabidopsis thaliana
AT1G65200 2.0kb upstream 2.0kb upstream 6320 true Chr1: 24218470-24224789 Arabidopsis thaliana
AT1G65200 2.0kb upstream 2.0kb upstream 2000 false Chr1: 24222790-24224789 Arabidopsis thaliana
AT1G65200 2.0kb downstream 2.0kb downstream 6320 true Chr1: 24216470-24222789 Arabidopsis thaliana
AT1G65200 2.0kb downstream 2.0kb downstream 2000 false Chr1: 24216470-24218469 Arabidopsis thaliana
AT1G65200 5.0kb upstream 5.0kb upstream 9320 true Chr1: 24218470-24227789 Arabidopsis thaliana
AT1G65200 5.0kb upstream 5.0kb upstream 5000 false Chr1: 24222790-24227789 Arabidopsis thaliana
AT1G65200 5.0kb downstream 5.0kb downstream 9320 true Chr1: 24213470-24222789 Arabidopsis thaliana
AT1G65200 5.0kb downstream 5.0kb downstream 5000 false Chr1: 24213470-24218469 Arabidopsis thaliana
AT1G65200 10.0kb upstream 10.0kb upstream 14320 true Chr1: 24218470-24232789 Arabidopsis thaliana
AT1G65200 10.0kb upstream 10.0kb upstream 10000 false Chr1: 24222790-24232789 Arabidopsis thaliana
AT1G65200 10.0kb downstream 10.0kb downstream 14320 true Chr1: 24208470-24222789 Arabidopsis thaliana
AT1G65200 10.0kb downstream 10.0kb downstream 10000 false Chr1: 24208470-24218469 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121499746 5273 Angiosperm View MSA
122338614 5261 Brassicaceae View MSA
123779169 5264 Brassicales-Malvales View MSA
124277499 5266 SBM View MSA
124132693 5268 Malvidae View MSA
123860967 5270 Rosid View MSA
123446543 5271 Pentapetalae View MSA
122482092 5272 Eudicot View MSA
120773083 5274 Embryophyte View MSA
122815407 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.023     Low Low
cufflinks 0.042     Low  
cufflinks 0.041     Low  
cufflinks 0.07     Low High
cufflinks 0.024     Low Low
cufflinks 0.04     Low  

0 Strain